RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 MYCBP2O75592 4640 aa1.23□□□□□ -2.21
CALCOCO2-223ENST00000514267 SPATA8Q6RVD6 105 aa1.22□□□□□ -2.21
CALCOCO2-223ENST00000514267 COX6B2Q6YFQ2 88 aa1.22□□□□□ -2.21
CALCOCO2-223ENST00000514267 RPL37P61927 97 aaKnown RBP1.21□□□□□ -2.22
CALCOCO2-223ENST00000514267 MUC17Q685J3 4493 aa1.21□□□□□ -2.22
CALCOCO2-223ENST00000514267 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
CALCOCO2-223ENST00000514267 S4R3F8 94 aa1.2□□□□□ -2.22
CALCOCO2-223ENST00000514267 LPAP08519 4548 aa1.18□□□□□ -2.22
CALCOCO2-223ENST00000514267 A0A0D9SG42 100 aa1.18□□□□□ -2.22
CALCOCO2-223ENST00000514267 H0YAA0 97 aa1.17□□□□□ -2.22
CALCOCO2-223ENST00000514267 MT1HL1P0DM35 61 aa1.16□□□□□ -2.22
CALCOCO2-223ENST00000514267 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
CALCOCO2-223ENST00000514267 LRP2P98164 4655 aa1.16□□□□□ -2.22
CALCOCO2-223ENST00000514267 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
CALCOCO2-223ENST00000514267 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
CALCOCO2-223ENST00000514267 DMBT1Q9UGM3 2413 aaPredicted RBP1.14□□□□□ -2.23
CALCOCO2-223ENST00000514267 CRIPTQ9P021 101 aa1.14□□□□□ -2.23
CALCOCO2-223ENST00000514267 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
CALCOCO2-223ENST00000514267 M0QZ58 72 aa1.12□□□□□ -2.23
CALCOCO2-223ENST00000514267 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
CALCOCO2-223ENST00000514267 RNF213Q63HN8 5207 aa1.12□□□□□ -2.23
CALCOCO2-223ENST00000514267 FLGP20930 4061 aaPredicted RBP1.09□□□□□ -2.23
CALCOCO2-223ENST00000514267 NEBP20929 6669 aa1.08□□□□□ -2.24
CALCOCO2-223ENST00000514267 SYNE2Q8WXH0 6885 aaKnown RBP1.08□□□□□ -2.24
CALCOCO2-223ENST00000514267 M0R2T5 61 aa1.08□□□□□ -2.24
CALCOCO2-223ENST00000514267 PLAC4Q8WY50 150 aa1.08□□□□□ -2.24
CALCOCO2-223ENST00000514267 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
CALCOCO2-223ENST00000514267 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
CALCOCO2-223ENST00000514267 SSPOA2VEC9 5147 aa1.02□□□□□ -2.25
CALCOCO2-223ENST00000514267 TNP1P09430 55 aa1.02□□□□□ -2.25
CALCOCO2-223ENST00000514267 KRTAP19-2Q3LHN2 52 aa1.01□□□□□ -2.25
CALCOCO2-223ENST00000514267 MT1HP80294 61 aa0.99□□□□□ -2.25
CALCOCO2-223ENST00000514267 MACF1Q9UPN3 7388 aaKnown RBP0.98□□□□□ -2.25
CALCOCO2-223ENST00000514267 MT2AP02795 61 aa0.97□□□□□ -2.25
CALCOCO2-223ENST00000514267 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
CALCOCO2-223ENST00000514267 MT1FP04733 61 aa0.96□□□□□ -2.26
CALCOCO2-223ENST00000514267 KRTAP20-1Q3LI63 56 aa0.96□□□□□ -2.26
CALCOCO2-223ENST00000514267 USH2AO75445 5202 aa0.94□□□□□ -2.26
CALCOCO2-223ENST00000514267 MUC12Q9UKN1 5478 aa0.93□□□□□ -2.26
CALCOCO2-223ENST00000514267 KRTAP19-8Q3LI54 63 aa0.92□□□□□ -2.26
CALCOCO2-223ENST00000514267 MT1BP07438 61 aa0.91□□□□□ -2.26
CALCOCO2-223ENST00000514267 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.26
CALCOCO2-223ENST00000514267 KMT2DO14686 5537 aa0.9□□□□□ -2.26
CALCOCO2-223ENST00000514267 MT1XP80297 61 aa0.9□□□□□ -2.27
CALCOCO2-223ENST00000514267 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
CALCOCO2-223ENST00000514267 AHNAK2Q8IVF2 5795 aa0.87□□□□□ -2.27
CALCOCO2-223ENST00000514267 KRTAP2-3P0C7H8 128 aa0.86□□□□□ -2.27
CALCOCO2-223ENST00000514267 KRTAP19-5Q3LI72 72 aa0.86□□□□□ -2.27
CALCOCO2-223ENST00000514267 KRTAP2-4Q9BYR9 128 aa0.86□□□□□ -2.27
CALCOCO2-223ENST00000514267 MDN1Q9NU22 5596 aa0.82□□□□□ -2.28
CALCOCO2-223ENST00000514267 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
CALCOCO2-223ENST00000514267 AHNAKQ09666 5890 aaKnown RBP0.81□□□□□ -2.28
CALCOCO2-223ENST00000514267 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
CALCOCO2-223ENST00000514267 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
CALCOCO2-223ENST00000514267 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
CALCOCO2-223ENST00000514267 MT1EP04732 61 aa0.79□□□□□ -2.28
CALCOCO2-223ENST00000514267 KRTAP19-7Q3SYF9 63 aa0.79□□□□□ -2.28
CALCOCO2-223ENST00000514267 MT1LQ93083 61 aa0.78□□□□□ -2.28
CALCOCO2-223ENST00000514267 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
CALCOCO2-223ENST00000514267 SPRR2FQ96RM1 72 aa0.77□□□□□ -2.29
CALCOCO2-223ENST00000514267 MT1GP13640 62 aa0.76□□□□□ -2.29
CALCOCO2-223ENST00000514267 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
CALCOCO2-223ENST00000514267 MT1MQ8N339 61 aa0.75□□□□□ -2.29
CALCOCO2-223ENST00000514267 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
CALCOCO2-223ENST00000514267 SPRR2EP22531 72 aa0.71□□□□□ -2.3
CALCOCO2-223ENST00000514267 SPRR2BP35325 72 aa0.71□□□□□ -2.3
CALCOCO2-223ENST00000514267 SPRR2AP35326 72 aa0.71□□□□□ -2.3
CALCOCO2-223ENST00000514267 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
CALCOCO2-223ENST00000514267 SPRR2DP22532 72 aa0.69□□□□□ -2.3
CALCOCO2-223ENST00000514267 MT1AP04731 61 aa0.67□□□□□ -2.3
CALCOCO2-223ENST00000514267 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
CALCOCO2-223ENST00000514267 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
CALCOCO2-223ENST00000514267 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
CALCOCO2-223ENST00000514267 MT4P47944 62 aa0.61□□□□□ -2.31
CALCOCO2-223ENST00000514267 PRM1P04553 51 aa0.6□□□□□ -2.31
CALCOCO2-223ENST00000514267 KRTAP20-2Q3LI61 65 aa0.55□□□□□ -2.32
CALCOCO2-223ENST00000514267 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
CALCOCO2-223ENST00000514267 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 828.7 ms