RNA–Protein interactions for RNA: ENST00000514233.1

SDHA-217, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 4

Gene SDHA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-217ENST00000514233 A8MU10 97 aa3.18□□□□□ -1.9
SDHA-217ENST00000514233 COX7CP15954 63 aa3.18□□□□□ -1.9
SDHA-217ENST00000514233 MT1LQ93083 61 aa3.18□□□□□ -1.9
SDHA-217ENST00000514233 H7BZZ5 65 aa3.17□□□□□ -1.9
SDHA-217ENST00000514233 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
SDHA-217ENST00000514233 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
SDHA-217ENST00000514233 A0A1B0GU69 56 aa3.15□□□□□ -1.91
SDHA-217ENST00000514233 KRTAP4-6Q9BYQ5 205 aa3.15□□□□□ -1.91
SDHA-217ENST00000514233 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
SDHA-217ENST00000514233 SMIM26A0A096LP01 95 aa3.14□□□□□ -1.91
SDHA-217ENST00000514233 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
SDHA-217ENST00000514233 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
SDHA-217ENST00000514233 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
SDHA-217ENST00000514233 TNP1P09430 55 aa3.09□□□□□ -1.91
SDHA-217ENST00000514233 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
SDHA-217ENST00000514233 ANAPC13Q9BS18 74 aa3.04□□□□□ -1.92
SDHA-217ENST00000514233 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
SDHA-217ENST00000514233 SPRR5A0A1B0GTR4 108 aa3.02□□□□□ -1.93
SDHA-217ENST00000514233 PRR15LQ9BU68 103 aa3.01□□□□□ -1.93
SDHA-217ENST00000514233 CCDC179H3BU77 68 aa3□□□□□ -1.93
SDHA-217ENST00000514233 KRTAP12-3P60328 96 aa3□□□□□ -1.93
SDHA-217ENST00000514233 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
SDHA-217ENST00000514233 PSPHP1O15172 72 aa2.99□□□□□ -1.93
SDHA-217ENST00000514233 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
SDHA-217ENST00000514233 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
SDHA-217ENST00000514233 ATP5EP56381 51 aaPredicted RBP2.95□□□□□ -1.94
SDHA-217ENST00000514233 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SDHA-217ENST00000514233 LINC01558Q9Y6Z2 57 aa2.95□□□□□ -1.94
SDHA-217ENST00000514233 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
SDHA-217ENST00000514233 UQCR11O14957 56 aa2.9□□□□□ -1.95
SDHA-217ENST00000514233 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
SDHA-217ENST00000514233 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
SDHA-217ENST00000514233 TMEM258P61165 79 aa2.85□□□□□ -1.95
SDHA-217ENST00000514233 MIR22HGQ0VDD5 57 aa2.85□□□□□ -1.95
SDHA-217ENST00000514233 KRTAP4-11Q9BYQ6 195 aa2.82□□□□□ -1.96
SDHA-217ENST00000514233 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
SDHA-217ENST00000514233 K7ERS5 55 aa2.79□□□□□ -1.96
SDHA-217ENST00000514233 RPS28P62857 69 aaKnown RBP2.79□□□□□ -1.96
SDHA-217ENST00000514233 PMAIP1Q13794 54 aa2.79□□□□□ -1.96
SDHA-217ENST00000514233 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
SDHA-217ENST00000514233 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
SDHA-217ENST00000514233 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
SDHA-217ENST00000514233 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
SDHA-217ENST00000514233 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
SDHA-217ENST00000514233 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
SDHA-217ENST00000514233 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
SDHA-217ENST00000514233 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
SDHA-217ENST00000514233 MT1AP04731 61 aa2.7□□□□□ -1.98
SDHA-217ENST00000514233 MT3P25713 68 aa2.69□□□□□ -1.98
SDHA-217ENST00000514233 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
SDHA-217ENST00000514233 Q1T7F1 81 aa2.67□□□□□ -1.98
SDHA-217ENST00000514233 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
SDHA-217ENST00000514233 A6NED7 52 aa2.65□□□□□ -1.99
SDHA-217ENST00000514233 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
SDHA-217ENST00000514233 CDC42SE1Q9NRR8 79 aa2.65□□□□□ -1.99
SDHA-217ENST00000514233 KRTAP9-6A8MVA2 160 aa2.62□□□□□ -1.99
SDHA-217ENST00000514233 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
SDHA-217ENST00000514233 ROMO1P60602 79 aa2.59□□□□□ -1.99
SDHA-217ENST00000514233 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
SDHA-217ENST00000514233 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
SDHA-217ENST00000514233 BRK1Q8WUW1 75 aa2.42□□□□□ -2.02
SDHA-217ENST00000514233 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
SDHA-217ENST00000514233 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
SDHA-217ENST00000514233 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
SDHA-217ENST00000514233 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
SDHA-217ENST00000514233 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
SDHA-217ENST00000514233 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SDHA-217ENST00000514233 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
SDHA-217ENST00000514233 INE1O15225 51 aa1.96□□□□□ -2.1
SDHA-217ENST00000514233 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
SDHA-217ENST00000514233 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
SDHA-217ENST00000514233 LCE3EQ5T5B0 92 aa1.87□□□□□ -2.11
SDHA-217ENST00000514233 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
SDHA-217ENST00000514233 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
SDHA-217ENST00000514233 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SDHA-217ENST00000514233 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
SDHA-217ENST00000514233 PRM1P04553 51 aa1.36□□□□□ -2.19
SDHA-217ENST00000514233 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 13.3 ms