RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 MT1LQ93083 61 aa4.05□□□□□ -1.76
HTT-213ENST00000513806 KRTAP20-1Q3LI63 56 aa4.04□□□□□ -1.76
HTT-213ENST00000513806 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
HTT-213ENST00000513806 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
HTT-213ENST00000513806 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
HTT-213ENST00000513806 MT1GP13640 62 aa3.98□□□□□ -1.77
HTT-213ENST00000513806 MT1MQ8N339 61 aa3.98□□□□□ -1.77
HTT-213ENST00000513806 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
HTT-213ENST00000513806 H3BS24 57 aa3.97□□□□□ -1.77
HTT-213ENST00000513806 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
HTT-213ENST00000513806 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
HTT-213ENST00000513806 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
HTT-213ENST00000513806 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
HTT-213ENST00000513806 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
HTT-213ENST00000513806 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
HTT-213ENST00000513806 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
HTT-213ENST00000513806 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
HTT-213ENST00000513806 PRO0628Q9UI54 55 aa3.86□□□□□ -1.79
HTT-213ENST00000513806 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
HTT-213ENST00000513806 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
HTT-213ENST00000513806 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
HTT-213ENST00000513806 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
HTT-213ENST00000513806 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
HTT-213ENST00000513806 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
HTT-213ENST00000513806 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
HTT-213ENST00000513806 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
HTT-213ENST00000513806 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
HTT-213ENST00000513806 MT4P47944 62 aa3.6□□□□□ -1.83
HTT-213ENST00000513806 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
HTT-213ENST00000513806 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
HTT-213ENST00000513806 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
HTT-213ENST00000513806 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
HTT-213ENST00000513806 KRTAP4-6Q9BYQ5 205 aa3.52□□□□□ -1.85
HTT-213ENST00000513806 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
HTT-213ENST00000513806 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
HTT-213ENST00000513806 HMCN1Q96RW7 5635 aa3.43□□□□□ -1.86
HTT-213ENST00000513806 MT1AP04731 61 aa3.43□□□□□ -1.86
HTT-213ENST00000513806 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
HTT-213ENST00000513806 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
HTT-213ENST00000513806 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
HTT-213ENST00000513806 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
HTT-213ENST00000513806 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
HTT-213ENST00000513806 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
HTT-213ENST00000513806 AHNAK2Q8IVF2 5795 aa3.23□□□□□ -1.89
HTT-213ENST00000513806 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
HTT-213ENST00000513806 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
HTT-213ENST00000513806 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
HTT-213ENST00000513806 MT3P25713 68 aa3.1□□□□□ -1.91
HTT-213ENST00000513806 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
HTT-213ENST00000513806 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
HTT-213ENST00000513806 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
HTT-213ENST00000513806 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
HTT-213ENST00000513806 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
HTT-213ENST00000513806 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
HTT-213ENST00000513806 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.94
HTT-213ENST00000513806 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
HTT-213ENST00000513806 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
HTT-213ENST00000513806 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
HTT-213ENST00000513806 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
HTT-213ENST00000513806 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
HTT-213ENST00000513806 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
HTT-213ENST00000513806 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
HTT-213ENST00000513806 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
HTT-213ENST00000513806 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
HTT-213ENST00000513806 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
HTT-213ENST00000513806 LCE1CQ5T751 118 aa2.56□□□□□ -2
HTT-213ENST00000513806 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
HTT-213ENST00000513806 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
HTT-213ENST00000513806 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
HTT-213ENST00000513806 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
HTT-213ENST00000513806 INE1O15225 51 aa2.2□□□□□ -2.06
HTT-213ENST00000513806 PRM1P04553 51 aa2.2□□□□□ -2.06
HTT-213ENST00000513806 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
HTT-213ENST00000513806 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
HTT-213ENST00000513806 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
HTT-213ENST00000513806 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
HTT-213ENST00000513806 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
HTT-213ENST00000513806 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 122.9 ms