RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
TPM3-221ENST00000513769 MT1BP07438 61 aa4.18□□□□□ -1.74
TPM3-221ENST00000513769 KRTAP5-1Q6L8H4 278 aa4.18□□□□□ -1.74
TPM3-221ENST00000513769 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
TPM3-221ENST00000513769 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
TPM3-221ENST00000513769 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
TPM3-221ENST00000513769 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
TPM3-221ENST00000513769 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
TPM3-221ENST00000513769 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
TPM3-221ENST00000513769 TNP1P09430 55 aa4.11□□□□□ -1.75
TPM3-221ENST00000513769 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
TPM3-221ENST00000513769 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
TPM3-221ENST00000513769 KRTAP6-3Q3LI67 103 aa4.09□□□□□ -1.75
TPM3-221ENST00000513769 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
TPM3-221ENST00000513769 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
TPM3-221ENST00000513769 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
TPM3-221ENST00000513769 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
TPM3-221ENST00000513769 MT1XP80297 61 aa4.05□□□□□ -1.76
TPM3-221ENST00000513769 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
TPM3-221ENST00000513769 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
TPM3-221ENST00000513769 KRTAP20-1Q3LI63 56 aa3.93□□□□□ -1.78
TPM3-221ENST00000513769 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
TPM3-221ENST00000513769 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
TPM3-221ENST00000513769 NEBP20929 6669 aa3.86□□□□□ -1.79
TPM3-221ENST00000513769 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
TPM3-221ENST00000513769 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
TPM3-221ENST00000513769 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
TPM3-221ENST00000513769 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
TPM3-221ENST00000513769 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
TPM3-221ENST00000513769 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
TPM3-221ENST00000513769 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
TPM3-221ENST00000513769 KMT2DO14686 5537 aa3.67□□□□□ -1.82
TPM3-221ENST00000513769 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
TPM3-221ENST00000513769 SPRR2EP22531 72 aa3.64□□□□□ -1.83
TPM3-221ENST00000513769 SPRR2BP35325 72 aa3.64□□□□□ -1.83
TPM3-221ENST00000513769 SPRR2AP35326 72 aa3.64□□□□□ -1.83
TPM3-221ENST00000513769 SPRR2FQ96RM1 72 aa3.64□□□□□ -1.83
TPM3-221ENST00000513769 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
TPM3-221ENST00000513769 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
TPM3-221ENST00000513769 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
TPM3-221ENST00000513769 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
TPM3-221ENST00000513769 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
TPM3-221ENST00000513769 MT1EP04732 61 aa3.56□□□□□ -1.84
TPM3-221ENST00000513769 SPRR2DP22532 72 aa3.53□□□□□ -1.84
TPM3-221ENST00000513769 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
TPM3-221ENST00000513769 MT1GP13640 62 aa3.5□□□□□ -1.85
TPM3-221ENST00000513769 MT1LQ93083 61 aa3.49□□□□□ -1.85
TPM3-221ENST00000513769 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
TPM3-221ENST00000513769 MT1MQ8N339 61 aa3.35□□□□□ -1.87
TPM3-221ENST00000513769 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
TPM3-221ENST00000513769 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
TPM3-221ENST00000513769 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TPM3-221ENST00000513769 DSTQ03001 7570 aaKnown RBP3.2□□□□□ -1.9
TPM3-221ENST00000513769 MT4P47944 62 aa3.11□□□□□ -1.91
TPM3-221ENST00000513769 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
TPM3-221ENST00000513769 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
TPM3-221ENST00000513769 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
TPM3-221ENST00000513769 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
TPM3-221ENST00000513769 MT1AP04731 61 aa3□□□□□ -1.93
TPM3-221ENST00000513769 INE1O15225 51 aa2.98□□□□□ -1.93
TPM3-221ENST00000513769 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
TPM3-221ENST00000513769 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
TPM3-221ENST00000513769 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
TPM3-221ENST00000513769 KRTAP12-4P60329 112 aa2.89□□□□□ -1.95
TPM3-221ENST00000513769 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
TPM3-221ENST00000513769 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
TPM3-221ENST00000513769 SYNE1Q8NF91 8797 aaKnown RBP2.76□□□□□ -1.97
TPM3-221ENST00000513769 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
TPM3-221ENST00000513769 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
TPM3-221ENST00000513769 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
TPM3-221ENST00000513769 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
TPM3-221ENST00000513769 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
TPM3-221ENST00000513769 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
TPM3-221ENST00000513769 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
TPM3-221ENST00000513769 PRM1P04553 51 aa2.16□□□□□ -2.06
TPM3-221ENST00000513769 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TPM3-221ENST00000513769 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
TPM3-221ENST00000513769 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 79.8 ms