RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
DDX41-216ENST00000513562 MT1LQ93083 61 aa3.85□□□□□ -1.79
DDX41-216ENST00000513562 A0A1B0GU69 56 aa3.84□□□□□ -1.79
DDX41-216ENST00000513562 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
DDX41-216ENST00000513562 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
DDX41-216ENST00000513562 A0A0D9SG42 100 aa3.81□□□□□ -1.8
DDX41-216ENST00000513562 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
DDX41-216ENST00000513562 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
DDX41-216ENST00000513562 V9GYY9 64 aa3.81□□□□□ -1.8
DDX41-216ENST00000513562 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
DDX41-216ENST00000513562 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
DDX41-216ENST00000513562 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
DDX41-216ENST00000513562 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
DDX41-216ENST00000513562 A0A1B0GU33 70 aa3.75□□□□□ -1.81
DDX41-216ENST00000513562 Q1T7F1 81 aa3.75□□□□□ -1.81
DDX41-216ENST00000513562 PSPHP1O15172 72 aa3.71□□□□□ -1.82
DDX41-216ENST00000513562 UQCR11O14957 56 aa3.69□□□□□ -1.82
DDX41-216ENST00000513562 SPATA8Q6RVD6 105 aa3.68□□□□□ -1.82
DDX41-216ENST00000513562 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
DDX41-216ENST00000513562 KRTAP12-4P60329 112 aa3.65□□□□□ -1.83
DDX41-216ENST00000513562 C10orf95Q9H7T3 257 aa3.64□□□□□ -1.83
DDX41-216ENST00000513562 A6NED7 52 aa3.63□□□□□ -1.83
DDX41-216ENST00000513562 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
DDX41-216ENST00000513562 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
DDX41-216ENST00000513562 A8MU10 97 aa3.6□□□□□ -1.83
DDX41-216ENST00000513562 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
DDX41-216ENST00000513562 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
DDX41-216ENST00000513562 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
DDX41-216ENST00000513562 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
DDX41-216ENST00000513562 SPINT4Q6UDR6 99 aa3.59□□□□□ -1.83
DDX41-216ENST00000513562 KRTAP4-11Q9BYQ6 195 aa3.58□□□□□ -1.84
DDX41-216ENST00000513562 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
DDX41-216ENST00000513562 K7ERS5 55 aa3.55□□□□□ -1.84
DDX41-216ENST00000513562 KRTAP12-1P59990 96 aa3.55□□□□□ -1.84
DDX41-216ENST00000513562 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
DDX41-216ENST00000513562 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
DDX41-216ENST00000513562 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
DDX41-216ENST00000513562 BRK1Q8WUW1 75 aa3.46□□□□□ -1.86
DDX41-216ENST00000513562 TNP1P09430 55 aa3.45□□□□□ -1.86
DDX41-216ENST00000513562 KRTAP12-3P60328 96 aa3.45□□□□□ -1.86
DDX41-216ENST00000513562 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
DDX41-216ENST00000513562 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
DDX41-216ENST00000513562 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
DDX41-216ENST00000513562 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
DDX41-216ENST00000513562 ROMO1P60602 79 aa3.32□□□□□ -1.88
DDX41-216ENST00000513562 KRTAP25-1Q3LHN0 102 aa3.3□□□□□ -1.88
DDX41-216ENST00000513562 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
DDX41-216ENST00000513562 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
DDX41-216ENST00000513562 PRO0628Q9UI54 55 aa3.27□□□□□ -1.89
DDX41-216ENST00000513562 MT1AP04731 61 aa3.26□□□□□ -1.89
DDX41-216ENST00000513562 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
DDX41-216ENST00000513562 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
DDX41-216ENST00000513562 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
DDX41-216ENST00000513562 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
DDX41-216ENST00000513562 LCE3CQ5T5A8 94 aa3.13□□□□□ -1.91
DDX41-216ENST00000513562 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
DDX41-216ENST00000513562 KTN1-AS1Q86SY8 53 aa3.07□□□□□ -1.92
DDX41-216ENST00000513562 NDUFAF8A1L188 74 aa3.03□□□□□ -1.92
DDX41-216ENST00000513562 MT3P25713 68 aa3□□□□□ -1.93
DDX41-216ENST00000513562 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
DDX41-216ENST00000513562 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
DDX41-216ENST00000513562 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
DDX41-216ENST00000513562 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
DDX41-216ENST00000513562 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
DDX41-216ENST00000513562 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
DDX41-216ENST00000513562 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
DDX41-216ENST00000513562 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
DDX41-216ENST00000513562 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
DDX41-216ENST00000513562 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
DDX41-216ENST00000513562 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
DDX41-216ENST00000513562 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
DDX41-216ENST00000513562 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
DDX41-216ENST00000513562 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
DDX41-216ENST00000513562 KRTAP4-4Q9BYR3 166 aa2.03□□□□□ -2.08
DDX41-216ENST00000513562 INE1O15225 51 aa1.95□□□□□ -2.1
DDX41-216ENST00000513562 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
DDX41-216ENST00000513562 PRM1P04553 51 aa1.71□□□□□ -2.14
DDX41-216ENST00000513562 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 81.7 ms