RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
RNF4-218ENST00000513284 SPATA8Q6RVD6 105 aa3.97□□□□□ -1.77
RNF4-218ENST00000513284 SPINT4Q6UDR6 99 aa3.97□□□□□ -1.77
RNF4-218ENST00000513284 KRTAP19-5Q3LI72 72 aa3.96□□□□□ -1.78
RNF4-218ENST00000513284 A0A1B0GU33 70 aa3.95□□□□□ -1.78
RNF4-218ENST00000513284 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
RNF4-218ENST00000513284 KRTAP12-1P59990 96 aa3.91□□□□□ -1.78
RNF4-218ENST00000513284 MT1LQ93083 61 aa3.91□□□□□ -1.78
RNF4-218ENST00000513284 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
RNF4-218ENST00000513284 A0A1B0GU69 56 aa3.85□□□□□ -1.79
RNF4-218ENST00000513284 ANAPC13Q9BS18 74 aa3.83□□□□□ -1.8
RNF4-218ENST00000513284 A8MU10 97 aa3.82□□□□□ -1.8
RNF4-218ENST00000513284 TNP1P09430 55 aa3.82□□□□□ -1.8
RNF4-218ENST00000513284 CCDC179H3BU77 68 aa3.79□□□□□ -1.8
RNF4-218ENST00000513284 KRTAP5-5Q701N2 237 aaPredicted RBP3.77□□□□□ -1.81
RNF4-218ENST00000513284 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
RNF4-218ENST00000513284 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
RNF4-218ENST00000513284 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
RNF4-218ENST00000513284 AHNAKQ09666 5890 aaKnown RBP3.75□□□□□ -1.81
RNF4-218ENST00000513284 LCE3AQ5TA76 89 aa3.75□□□□□ -1.81
RNF4-218ENST00000513284 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
RNF4-218ENST00000513284 ATP5EP56381 51 aaPredicted RBP3.72□□□□□ -1.81
RNF4-218ENST00000513284 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
RNF4-218ENST00000513284 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
RNF4-218ENST00000513284 PRR15LQ9BU68 103 aa3.71□□□□□ -1.82
RNF4-218ENST00000513284 LINC01558Q9Y6Z2 57 aa3.71□□□□□ -1.82
RNF4-218ENST00000513284 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
RNF4-218ENST00000513284 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
RNF4-218ENST00000513284 KRTAP12-3P60328 96 aa3.64□□□□□ -1.83
RNF4-218ENST00000513284 TMEM258P61165 79 aa3.63□□□□□ -1.83
RNF4-218ENST00000513284 UQCR11O14957 56 aa3.61□□□□□ -1.83
RNF4-218ENST00000513284 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
RNF4-218ENST00000513284 MIR22HGQ0VDD5 57 aa3.52□□□□□ -1.85
RNF4-218ENST00000513284 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
RNF4-218ENST00000513284 K7ERS5 55 aa3.48□□□□□ -1.85
RNF4-218ENST00000513284 PSPHP1O15172 72 aa3.44□□□□□ -1.86
RNF4-218ENST00000513284 Q1T7F1 81 aa3.44□□□□□ -1.86
RNF4-218ENST00000513284 V9GYY9 64 aa3.43□□□□□ -1.86
RNF4-218ENST00000513284 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
RNF4-218ENST00000513284 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
RNF4-218ENST00000513284 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
RNF4-218ENST00000513284 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
RNF4-218ENST00000513284 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
RNF4-218ENST00000513284 A6NED7 52 aa3.3□□□□□ -1.88
RNF4-218ENST00000513284 MT1AP04731 61 aa3.3□□□□□ -1.88
RNF4-218ENST00000513284 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
RNF4-218ENST00000513284 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
RNF4-218ENST00000513284 CDC42SE1Q9NRR8 79 aa3.26□□□□□ -1.89
RNF4-218ENST00000513284 RPS28P62857 69 aaKnown RBP3.23□□□□□ -1.89
RNF4-218ENST00000513284 ROMO1P60602 79 aa3.22□□□□□ -1.89
RNF4-218ENST00000513284 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
RNF4-218ENST00000513284 PCP4P48539 62 aa3.11□□□□□ -1.91
RNF4-218ENST00000513284 MT3P25713 68 aa3.04□□□□□ -1.92
RNF4-218ENST00000513284 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
RNF4-218ENST00000513284 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
RNF4-218ENST00000513284 BRK1Q8WUW1 75 aa2.78□□□□□ -1.96
RNF4-218ENST00000513284 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
RNF4-218ENST00000513284 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
RNF4-218ENST00000513284 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
RNF4-218ENST00000513284 PHGR1C9JFL3 82 aa2.56□□□□□ -2
RNF4-218ENST00000513284 PRAC1Q96KF2 57 aa2.55□□□□□ -2
RNF4-218ENST00000513284 LCE1FQ5T754 118 aa2.54□□□□□ -2
RNF4-218ENST00000513284 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.53□□□□□ -2
RNF4-218ENST00000513284 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
RNF4-218ENST00000513284 PRO0628Q9UI54 55 aa2.37□□□□□ -2.03
RNF4-218ENST00000513284 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
RNF4-218ENST00000513284 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
RNF4-218ENST00000513284 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
RNF4-218ENST00000513284 SVIPQ8NHG7 77 aa2.15□□□□□ -2.07
RNF4-218ENST00000513284 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
RNF4-218ENST00000513284 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
RNF4-218ENST00000513284 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
RNF4-218ENST00000513284 A0A0A0MQY5 61 aa2.08□□□□□ -2.08
RNF4-218ENST00000513284 NDUFAF8A1L188 74 aa2.01□□□□□ -2.09
RNF4-218ENST00000513284 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
RNF4-218ENST00000513284 PRM1P04553 51 aa1.65□□□□□ -2.15
RNF4-218ENST00000513284 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
RNF4-218ENST00000513284 INE1O15225 51 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 143.8 ms