RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
HMGCL-209ENST00000513148 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
HMGCL-209ENST00000513148 NEBP20929 6669 aa6.25□□□□□ -1.41
HMGCL-209ENST00000513148 SPRR2EP22531 72 aa6.23□□□□□ -1.41
HMGCL-209ENST00000513148 SPRR2BP35325 72 aa6.23□□□□□ -1.41
HMGCL-209ENST00000513148 SPRR2AP35326 72 aa6.23□□□□□ -1.41
HMGCL-209ENST00000513148 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
HMGCL-209ENST00000513148 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
HMGCL-209ENST00000513148 KRTAP19-7Q3SYF9 63 aa6.15□□□□□ -1.43
HMGCL-209ENST00000513148 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
HMGCL-209ENST00000513148 MT1EP04732 61 aa6.08□□□□□ -1.44
HMGCL-209ENST00000513148 SPRR2DP22532 72 aa6.01□□□□□ -1.45
HMGCL-209ENST00000513148 KRTAP20-1Q3LI63 56 aa5.98□□□□□ -1.45
HMGCL-209ENST00000513148 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
HMGCL-209ENST00000513148 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
HMGCL-209ENST00000513148 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
HMGCL-209ENST00000513148 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
HMGCL-209ENST00000513148 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
HMGCL-209ENST00000513148 MT1LQ93083 61 aa5.87□□□□□ -1.47
HMGCL-209ENST00000513148 MT1GP13640 62 aa5.83□□□□□ -1.48
HMGCL-209ENST00000513148 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
HMGCL-209ENST00000513148 MT1MQ8N339 61 aa5.76□□□□□ -1.49
HMGCL-209ENST00000513148 KRTAP2-2Q9BYT5 123 aa5.74□□□□□ -1.49
HMGCL-209ENST00000513148 KRTAP2-1Q9BYU5 128 aa5.74□□□□□ -1.49
HMGCL-209ENST00000513148 DSTQ03001 7570 aaKnown RBP5.71□□□□□ -1.5
HMGCL-209ENST00000513148 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
HMGCL-209ENST00000513148 KRTAP4-7Q9BYR0 210 aa5.65□□□□□ -1.5
HMGCL-209ENST00000513148 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
HMGCL-209ENST00000513148 KRTAP19-4Q3LI73 84 aa5.48□□□□□ -1.53
HMGCL-209ENST00000513148 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
HMGCL-209ENST00000513148 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
HMGCL-209ENST00000513148 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
HMGCL-209ENST00000513148 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
HMGCL-209ENST00000513148 MT4P47944 62 aa5.25□□□□□ -1.57
HMGCL-209ENST00000513148 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
HMGCL-209ENST00000513148 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
HMGCL-209ENST00000513148 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
HMGCL-209ENST00000513148 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
HMGCL-209ENST00000513148 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
HMGCL-209ENST00000513148 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
HMGCL-209ENST00000513148 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
HMGCL-209ENST00000513148 MT1AP04731 61 aa4.98□□□□□ -1.61
HMGCL-209ENST00000513148 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
HMGCL-209ENST00000513148 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
HMGCL-209ENST00000513148 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
HMGCL-209ENST00000513148 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.64
HMGCL-209ENST00000513148 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
HMGCL-209ENST00000513148 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
HMGCL-209ENST00000513148 GPR98Q8WXG9 6306 aa4.76□□□□□ -1.65
HMGCL-209ENST00000513148 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
HMGCL-209ENST00000513148 KRTAP5-2Q701N4 177 aa4.67□□□□□ -1.66
HMGCL-209ENST00000513148 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.66
HMGCL-209ENST00000513148 MT3P25713 68 aa4.54□□□□□ -1.68
HMGCL-209ENST00000513148 KRTAP4-11Q9BYQ6 195 aa4.44□□□□□ -1.7
HMGCL-209ENST00000513148 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
HMGCL-209ENST00000513148 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
HMGCL-209ENST00000513148 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
HMGCL-209ENST00000513148 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
HMGCL-209ENST00000513148 PRM1P04553 51 aa4.34□□□□□ -1.71
HMGCL-209ENST00000513148 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
HMGCL-209ENST00000513148 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
HMGCL-209ENST00000513148 KRTAP5-8O75690 187 aa4.28□□□□□ -1.73
HMGCL-209ENST00000513148 KRTAP5-1Q6L8H4 278 aa4.13□□□□□ -1.75
HMGCL-209ENST00000513148 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
HMGCL-209ENST00000513148 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
HMGCL-209ENST00000513148 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
HMGCL-209ENST00000513148 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
HMGCL-209ENST00000513148 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
HMGCL-209ENST00000513148 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
HMGCL-209ENST00000513148 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
HMGCL-209ENST00000513148 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
HMGCL-209ENST00000513148 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
HMGCL-209ENST00000513148 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
HMGCL-209ENST00000513148 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
HMGCL-209ENST00000513148 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
HMGCL-209ENST00000513148 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
HMGCL-209ENST00000513148 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
HMGCL-209ENST00000513148 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 38 ms