RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 C10orf95Q9H7T3 257 aa4.03□□□□□ -1.76
SSBP2-216ENST00000512923 TNP1P09430 55 aa3.99□□□□□ -1.77
SSBP2-216ENST00000512923 KRTAP10-12P60413 245 aa3.99□□□□□ -1.77
SSBP2-216ENST00000512923 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
SSBP2-216ENST00000512923 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
SSBP2-216ENST00000512923 ROMO1P60602 79 aa3.95□□□□□ -1.78
SSBP2-216ENST00000512923 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
SSBP2-216ENST00000512923 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
SSBP2-216ENST00000512923 KMT2DO14686 5537 aa3.89□□□□□ -1.79
SSBP2-216ENST00000512923 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
SSBP2-216ENST00000512923 PRO0628Q9UI54 55 aa3.89□□□□□ -1.79
SSBP2-216ENST00000512923 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
SSBP2-216ENST00000512923 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
SSBP2-216ENST00000512923 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
SSBP2-216ENST00000512923 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
SSBP2-216ENST00000512923 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
SSBP2-216ENST00000512923 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
SSBP2-216ENST00000512923 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
SSBP2-216ENST00000512923 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
SSBP2-216ENST00000512923 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
SSBP2-216ENST00000512923 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
SSBP2-216ENST00000512923 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
SSBP2-216ENST00000512923 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
SSBP2-216ENST00000512923 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
SSBP2-216ENST00000512923 PRAC1Q96KF2 57 aa3.72□□□□□ -1.81
SSBP2-216ENST00000512923 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
SSBP2-216ENST00000512923 MT1EP04732 61 aa3.7□□□□□ -1.82
SSBP2-216ENST00000512923 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
SSBP2-216ENST00000512923 MDN1Q9NU22 5596 aa3.67□□□□□ -1.82
SSBP2-216ENST00000512923 SPRR2EP22531 72 aa3.66□□□□□ -1.82
SSBP2-216ENST00000512923 SPRR2BP35325 72 aa3.66□□□□□ -1.82
SSBP2-216ENST00000512923 SPRR2AP35326 72 aa3.66□□□□□ -1.82
SSBP2-216ENST00000512923 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
SSBP2-216ENST00000512923 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
SSBP2-216ENST00000512923 MT1LQ93083 61 aa3.59□□□□□ -1.83
SSBP2-216ENST00000512923 MT1GP13640 62 aa3.56□□□□□ -1.84
SSBP2-216ENST00000512923 SPRR2DP22532 72 aa3.53□□□□□ -1.84
SSBP2-216ENST00000512923 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
SSBP2-216ENST00000512923 NEBP20929 6669 aa3.53□□□□□ -1.85
SSBP2-216ENST00000512923 MT1MQ8N339 61 aa3.5□□□□□ -1.85
SSBP2-216ENST00000512923 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SSBP2-216ENST00000512923 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
SSBP2-216ENST00000512923 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
SSBP2-216ENST00000512923 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SSBP2-216ENST00000512923 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SSBP2-216ENST00000512923 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
SSBP2-216ENST00000512923 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
SSBP2-216ENST00000512923 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
SSBP2-216ENST00000512923 SPRR5A0A1B0GTR4 108 aa3.21□□□□□ -1.89
SSBP2-216ENST00000512923 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
SSBP2-216ENST00000512923 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
SSBP2-216ENST00000512923 MT1AP04731 61 aa3.07□□□□□ -1.92
SSBP2-216ENST00000512923 MT4P47944 62 aa3.05□□□□□ -1.92
SSBP2-216ENST00000512923 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
SSBP2-216ENST00000512923 KRTAP12-4P60329 112 aa3.02□□□□□ -1.93
SSBP2-216ENST00000512923 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SSBP2-216ENST00000512923 HMCN1Q96RW7 5635 aa2.98□□□□□ -1.93
SSBP2-216ENST00000512923 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SSBP2-216ENST00000512923 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
SSBP2-216ENST00000512923 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
SSBP2-216ENST00000512923 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
SSBP2-216ENST00000512923 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
SSBP2-216ENST00000512923 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
SSBP2-216ENST00000512923 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
SSBP2-216ENST00000512923 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
SSBP2-216ENST00000512923 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
SSBP2-216ENST00000512923 KRTAP5-8O75690 187 aa2.59□□□□□ -2
SSBP2-216ENST00000512923 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
SSBP2-216ENST00000512923 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
SSBP2-216ENST00000512923 MUC5ACP98088 5654 aa2.32□□□□□ -2.04
SSBP2-216ENST00000512923 INE1O15225 51 aa2.3□□□□□ -2.04
SSBP2-216ENST00000512923 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SSBP2-216ENST00000512923 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
SSBP2-216ENST00000512923 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
SSBP2-216ENST00000512923 PRM1P04553 51 aa2.04□□□□□ -2.08
SSBP2-216ENST00000512923 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
SSBP2-216ENST00000512923 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
SSBP2-216ENST00000512923 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 109.9 ms