RNA–Protein interactions for RNA: ENST00000512380.1

PDLIM3-208, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-208ENST00000512380 CHKB-CPT1BH3BT56 60 aa2.61□□□□□ -1.99
PDLIM3-208ENST00000512380 Q5VV11 94 aa2.58□□□□□ -2
PDLIM3-208ENST00000512380 S4R3F8 94 aa2.55□□□□□ -2
PDLIM3-208ENST00000512380 FAT4Q6V0I7 4981 aa2.55□□□□□ -2
PDLIM3-208ENST00000512380 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
PDLIM3-208ENST00000512380 SERP2Q8N6R1 65 aa2.53□□□□□ -2
PDLIM3-208ENST00000512380 NDUFC1O43677 76 aa2.52□□□□□ -2.01
PDLIM3-208ENST00000512380 ACYP2P14621 99 aa2.52□□□□□ -2.01
PDLIM3-208ENST00000512380 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
PDLIM3-208ENST00000512380 PLAC4Q8WY50 150 aa2.52□□□□□ -2.01
PDLIM3-208ENST00000512380 MT2AP02795 61 aa2.49□□□□□ -2.01
PDLIM3-208ENST00000512380 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
PDLIM3-208ENST00000512380 MT1FP04733 61 aa2.46□□□□□ -2.02
PDLIM3-208ENST00000512380 FLGP20930 4061 aaPredicted RBP2.44□□□□□ -2.02
PDLIM3-208ENST00000512380 H7BZZ5 65 aa2.42□□□□□ -2.02
PDLIM3-208ENST00000512380 LINC01558Q9Y6Z2 57 aa2.42□□□□□ -2.02
PDLIM3-208ENST00000512380 UQCR11O14957 56 aa2.41□□□□□ -2.02
PDLIM3-208ENST00000512380 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
PDLIM3-208ENST00000512380 H0YAA0 97 aa2.4□□□□□ -2.03
PDLIM3-208ENST00000512380 CRIPTQ9P021 101 aa2.4□□□□□ -2.03
PDLIM3-208ENST00000512380 SPRR2GQ9BYE4 73 aa2.35□□□□□ -2.03
PDLIM3-208ENST00000512380 M0QZ58 72 aa2.33□□□□□ -2.04
PDLIM3-208ENST00000512380 FSIP2Q5CZC0 6907 aa2.32□□□□□ -2.04
PDLIM3-208ENST00000512380 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
PDLIM3-208ENST00000512380 PRR15LQ9BU68 103 aa2.31□□□□□ -2.04
PDLIM3-208ENST00000512380 A0A1B0GU69 56 aa2.29□□□□□ -2.04
PDLIM3-208ENST00000512380 MT1BP07438 61 aa2.29□□□□□ -2.04
PDLIM3-208ENST00000512380 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
PDLIM3-208ENST00000512380 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
PDLIM3-208ENST00000512380 A0A0D9SG42 100 aa2.23□□□□□ -2.05
PDLIM3-208ENST00000512380 USH2AO75445 5202 aa2.21□□□□□ -2.06
PDLIM3-208ENST00000512380 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PDLIM3-208ENST00000512380 MT1XP80297 61 aa2.17□□□□□ -2.06
PDLIM3-208ENST00000512380 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
PDLIM3-208ENST00000512380 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
PDLIM3-208ENST00000512380 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.07
PDLIM3-208ENST00000512380 MACF1Q9UPN3 7388 aaKnown RBP2.08□□□□□ -2.08
PDLIM3-208ENST00000512380 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
PDLIM3-208ENST00000512380 TNP1P09430 55 aa2.06□□□□□ -2.08
PDLIM3-208ENST00000512380 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
PDLIM3-208ENST00000512380 C10orf95Q9H7T3 257 aa2.05□□□□□ -2.08
PDLIM3-208ENST00000512380 SPRR2EP22531 72 aa2□□□□□ -2.09
PDLIM3-208ENST00000512380 SPRR2BP35325 72 aa2□□□□□ -2.09
PDLIM3-208ENST00000512380 SPRR2AP35326 72 aa2□□□□□ -2.09
PDLIM3-208ENST00000512380 KRTAP19-5Q3LI72 72 aa1.96□□□□□ -2.1
PDLIM3-208ENST00000512380 KRTAP2-3P0C7H8 128 aa1.93□□□□□ -2.1
PDLIM3-208ENST00000512380 SPRR2DP22532 72 aa1.93□□□□□ -2.1
PDLIM3-208ENST00000512380 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
PDLIM3-208ENST00000512380 KRTAP2-4Q9BYR9 128 aa1.93□□□□□ -2.1
PDLIM3-208ENST00000512380 KMT2DO14686 5537 aa1.92□□□□□ -2.1
PDLIM3-208ENST00000512380 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
PDLIM3-208ENST00000512380 MT1EP04732 61 aa1.91□□□□□ -2.1
PDLIM3-208ENST00000512380 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.11
PDLIM3-208ENST00000512380 NEBP20929 6669 aa1.9□□□□□ -2.11
PDLIM3-208ENST00000512380 MT1GP13640 62 aa1.89□□□□□ -2.11
PDLIM3-208ENST00000512380 KRTAP2-1Q9BYU5 128 aa1.87□□□□□ -2.11
PDLIM3-208ENST00000512380 MT1LQ93083 61 aa1.86□□□□□ -2.11
PDLIM3-208ENST00000512380 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
PDLIM3-208ENST00000512380 MT1MQ8N339 61 aa1.82□□□□□ -2.12
PDLIM3-208ENST00000512380 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
PDLIM3-208ENST00000512380 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
PDLIM3-208ENST00000512380 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
PDLIM3-208ENST00000512380 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
PDLIM3-208ENST00000512380 MT4P47944 62 aa1.69□□□□□ -2.14
PDLIM3-208ENST00000512380 MT1AP04731 61 aa1.58□□□□□ -2.16
PDLIM3-208ENST00000512380 KRTAP6-1Q3LI64 71 aa1.57□□□□□ -2.16
PDLIM3-208ENST00000512380 KRTAP20-2Q3LI61 65 aa1.56□□□□□ -2.16
PDLIM3-208ENST00000512380 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
PDLIM3-208ENST00000512380 KRTAP6-2Q3LI66 62 aa1.49□□□□□ -2.17
PDLIM3-208ENST00000512380 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
PDLIM3-208ENST00000512380 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
PDLIM3-208ENST00000512380 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
PDLIM3-208ENST00000512380 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
PDLIM3-208ENST00000512380 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
PDLIM3-208ENST00000512380 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
PDLIM3-208ENST00000512380 PRM1P04553 51 aa1□□□□□ -2.25
PDLIM3-208ENST00000512380 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
PDLIM3-208ENST00000512380 PHGR1C9JFL3 82 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 92.6 ms