RNA–Protein interactions for RNA: ENST00000512053.1

HMGCR-211, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 465 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-211ENST00000512053 H7BZZ5 65 aa2.92□□□□□ -1.94
HMGCR-211ENST00000512053 LINC01554Q52M75 96 aa2.91□□□□□ -1.94
HMGCR-211ENST00000512053 SPANXA2-OT1Q8N9U9 137 aa2.88□□□□□ -1.95
HMGCR-211ENST00000512053 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
HMGCR-211ENST00000512053 P0C880 135 aa2.86□□□□□ -1.95
HMGCR-211ENST00000512053 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
HMGCR-211ENST00000512053 Q1T7F1 81 aa2.81□□□□□ -1.96
HMGCR-211ENST00000512053 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
HMGCR-211ENST00000512053 ACYP2P14621 99 aa2.79□□□□□ -1.96
HMGCR-211ENST00000512053 COA5Q86WW8 74 aa2.79□□□□□ -1.96
HMGCR-211ENST00000512053 CHKB-CPT1BH3BT56 60 aa2.76□□□□□ -1.97
HMGCR-211ENST00000512053 SPTSSBQ8NFR3 76 aa2.74□□□□□ -1.97
HMGCR-211ENST00000512053 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
HMGCR-211ENST00000512053 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
HMGCR-211ENST00000512053 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
HMGCR-211ENST00000512053 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
HMGCR-211ENST00000512053 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
HMGCR-211ENST00000512053 MT1EP04732 61 aa2.68□□□□□ -1.98
HMGCR-211ENST00000512053 MT4P47944 62 aa2.68□□□□□ -1.98
HMGCR-211ENST00000512053 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
HMGCR-211ENST00000512053 CDC42SE1Q9NRR8 79 aa2.68□□□□□ -1.98
HMGCR-211ENST00000512053 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
HMGCR-211ENST00000512053 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
HMGCR-211ENST00000512053 LINC01558Q9Y6Z2 57 aa2.67□□□□□ -1.98
HMGCR-211ENST00000512053 MT1GP13640 62 aa2.66□□□□□ -1.98
HMGCR-211ENST00000512053 PSPHP1O15172 72 aa2.65□□□□□ -1.99
HMGCR-211ENST00000512053 PRR15LQ9BU68 103 aa2.65□□□□□ -1.99
HMGCR-211ENST00000512053 A0A0A0MQY5 61 aa2.64□□□□□ -1.99
HMGCR-211ENST00000512053 A0A1B0GU69 56 aa2.63□□□□□ -1.99
HMGCR-211ENST00000512053 A6NED7 52 aa2.62□□□□□ -1.99
HMGCR-211ENST00000512053 A0A0D9SG42 100 aa2.61□□□□□ -1.99
HMGCR-211ENST00000512053 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
HMGCR-211ENST00000512053 KRTAP19-5Q3LI72 72 aa2.59□□□□□ -1.99
HMGCR-211ENST00000512053 A8MU10 97 aa2.57□□□□□ -2
HMGCR-211ENST00000512053 MT1MQ8N339 61 aa2.57□□□□□ -2
HMGCR-211ENST00000512053 KRTAP13-4Q3LI77 160 aa2.56□□□□□ -2
HMGCR-211ENST00000512053 A0A1B0GU33 70 aa2.55□□□□□ -2
HMGCR-211ENST00000512053 UQCR11O14957 56 aa2.55□□□□□ -2
HMGCR-211ENST00000512053 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
HMGCR-211ENST00000512053 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
HMGCR-211ENST00000512053 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
HMGCR-211ENST00000512053 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
HMGCR-211ENST00000512053 MT1LQ93083 61 aa2.53□□□□□ -2
HMGCR-211ENST00000512053 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
HMGCR-211ENST00000512053 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
HMGCR-211ENST00000512053 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
HMGCR-211ENST00000512053 ROMO1P60602 79 aa2.5□□□□□ -2.01
HMGCR-211ENST00000512053 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
HMGCR-211ENST00000512053 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
HMGCR-211ENST00000512053 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
HMGCR-211ENST00000512053 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
HMGCR-211ENST00000512053 TNP1P09430 55 aa2.44□□□□□ -2.02
HMGCR-211ENST00000512053 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
HMGCR-211ENST00000512053 KRTAP20-2Q3LI61 65 aa2.44□□□□□ -2.02
HMGCR-211ENST00000512053 K7ERS5 55 aa2.43□□□□□ -2.02
HMGCR-211ENST00000512053 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
HMGCR-211ENST00000512053 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
HMGCR-211ENST00000512053 KRTAP25-1Q3LHN0 102 aa2.4□□□□□ -2.03
HMGCR-211ENST00000512053 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
HMGCR-211ENST00000512053 LCE1BQ5T7P3 118 aa2.37□□□□□ -2.03
HMGCR-211ENST00000512053 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
HMGCR-211ENST00000512053 LUZP6Q538Z0 58 aa2.36□□□□□ -2.03
HMGCR-211ENST00000512053 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
HMGCR-211ENST00000512053 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
HMGCR-211ENST00000512053 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
HMGCR-211ENST00000512053 MT1AP04731 61 aa2.16□□□□□ -2.06
HMGCR-211ENST00000512053 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
HMGCR-211ENST00000512053 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
HMGCR-211ENST00000512053 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
HMGCR-211ENST00000512053 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
HMGCR-211ENST00000512053 INE1O15225 51 aa1.99□□□□□ -2.09
HMGCR-211ENST00000512053 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
HMGCR-211ENST00000512053 LCE3DQ9BYE3 92 aa1.81□□□□□ -2.12
HMGCR-211ENST00000512053 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
HMGCR-211ENST00000512053 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
HMGCR-211ENST00000512053 PRM1P04553 51 aa1.2□□□□□ -2.22
HMGCR-211ENST00000512053 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
HMGCR-211ENST00000512053 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 58.7 ms