RNA–Protein interactions for RNA: ENST00000511425.5

IFT122-222, Transcript of intraflagellar transport 122, human

TSL 2

Gene IFT122, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT122-222	ENST00000511425	KRTAP2-1	Q9BYU5	128 aa		4.8	□□□□□ -1.64
IFT122-222	ENST00000511425	KRTAP9-6	A8MVA2	160 aa		4.77	□□□□□ -1.65
IFT122-222	ENST00000511425	KRTAP19-7	Q3SYF9	63 aa		4.76	□□□□□ -1.65
IFT122-222	ENST00000511425	MACF1	Q9UPN3	7388 aa	Known RBP	4.74	□□□□□ -1.65
IFT122-222	ENST00000511425	SYNE2	Q8WXH0	6885 aa	Known RBP	4.66	□□□□□ -1.66
IFT122-222	ENST00000511425	MT1L	Q93083	61 aa		4.66	□□□□□ -1.66
IFT122-222	ENST00000511425	MT1E	P04732	61 aa		4.64	□□□□□ -1.67
IFT122-222	ENST00000511425	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.6	□□□□□ -1.67
IFT122-222	ENST00000511425	KRTAP4-7	Q9BYR0	210 aa		4.58	□□□□□ -1.68
IFT122-222	ENST00000511425	MUC12	Q9UKN1	5478 aa		4.51	□□□□□ -1.69
IFT122-222	ENST00000511425	SPRR2F	Q96RM1	72 aa		4.43	□□□□□ -1.7
IFT122-222	ENST00000511425	MDN1	Q9NU22	5596 aa		4.42	□□□□□ -1.7
IFT122-222	ENST00000511425	KRTAP5-9	P26371	169 aa		4.4	□□□□□ -1.7
IFT122-222	ENST00000511425	KRTAP9-7	A8MTY7	169 aa		4.4	□□□□□ -1.71
IFT122-222	ENST00000511425	KRTAP6-3	Q3LI67	103 aa		4.39	□□□□□ -1.71
IFT122-222	ENST00000511425	MT1G	P13640	62 aa		4.36	□□□□□ -1.71
IFT122-222	ENST00000511425	KRTAP19-3	Q7Z4W3	81 aa		4.36	□□□□□ -1.71
IFT122-222	ENST00000511425	MT1M	Q8N339	61 aa		4.33	□□□□□ -1.72
IFT122-222	ENST00000511425	KRTAP4-3	Q9BYR4	195 aa		4.29	□□□□□ -1.72
IFT122-222	ENST00000511425	LOC100996750	A0A140TA64	210 aa		4.27	□□□□□ -1.73
IFT122-222	ENST00000511425	LCE1A	Q5T7P2	110 aa		4.26	□□□□□ -1.73
IFT122-222	ENST00000511425	LCE5A	Q5TCM9	118 aa		4.25	□□□□□ -1.73
IFT122-222	ENST00000511425	SPRR2E	P22531	72 aa		4.23	□□□□□ -1.73
IFT122-222	ENST00000511425	SPRR2B	P35325	72 aa		4.23	□□□□□ -1.73
IFT122-222	ENST00000511425	SPRR2A	P35326	72 aa		4.23	□□□□□ -1.73
IFT122-222	ENST00000511425	KRTAP12-4	P60329	112 aa		4.22	□□□□□ -1.73
IFT122-222	ENST00000511425	NEB	P20929	6669 aa		4.2	□□□□□ -1.74
IFT122-222	ENST00000511425	DST	Q03001	7570 aa	Known RBP	4.14	□□□□□ -1.75
IFT122-222	ENST00000511425	MT1A	P04731	61 aa		4.1	□□□□□ -1.75
IFT122-222	ENST00000511425	SPRR2D	P22532	72 aa		4.07	□□□□□ -1.76
IFT122-222	ENST00000511425	LCE3B	Q5TA77	95 aa		4.01	□□□□□ -1.77
IFT122-222	ENST00000511425	LCE3D	Q9BYE3	92 aa		3.92	□□□□□ -1.78
IFT122-222	ENST00000511425	KRTAP6-1	Q3LI64	71 aa		3.91	□□□□□ -1.78
IFT122-222	ENST00000511425	LCE3E	Q5T5B0	92 aa		3.9	□□□□□ -1.79
IFT122-222	ENST00000511425	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.88	□□□□□ -1.79
IFT122-222	ENST00000511425	KRTAP4-9	Q9BYQ8	210 aa		3.87	□□□□□ -1.79
IFT122-222	ENST00000511425	KRTAP20-1	Q3LI63	56 aa		3.86	□□□□□ -1.79
IFT122-222	ENST00000511425	KRTAP2-2	Q9BYT5	123 aa		3.78	□□□□□ -1.8
IFT122-222	ENST00000511425	PRM1	P04553	51 aa		3.74	□□□□□ -1.81
IFT122-222	ENST00000511425	KRTAP9-4	Q9BYQ2	154 aa		3.69	□□□□□ -1.82
IFT122-222	ENST00000511425	SYNE1	Q8NF91	8797 aa	Known RBP	3.68	□□□□□ -1.82
IFT122-222	ENST00000511425	KRTAP5-4	Q6L8H1	288 aa		3.64	□□□□□ -1.83
IFT122-222	ENST00000511425	MT4	P47944	62 aa		3.59	□□□□□ -1.84
IFT122-222	ENST00000511425	KRTAP6-2	Q3LI66	62 aa		3.59	□□□□□ -1.84
IFT122-222	ENST00000511425	HMCN1	Q96RW7	5635 aa		3.56	□□□□□ -1.84
IFT122-222	ENST00000511425	LCE4A	Q5TA78	99 aa		3.56	□□□□□ -1.84
IFT122-222	ENST00000511425	MT3	P25713	68 aa		3.55	□□□□□ -1.84
IFT122-222	ENST00000511425	KRTAP4-6	Q9BYQ5	205 aa		3.55	□□□□□ -1.84
IFT122-222	ENST00000511425	LCE1D	Q5T752	114 aa		3.55	□□□□□ -1.84
IFT122-222	ENST00000511425	KRTAP20-2	Q3LI61	65 aa		3.43	□□□□□ -1.86
IFT122-222	ENST00000511425	KRTAP5-3	Q6L8H2	238 aa		3.31	□□□□□ -1.88
IFT122-222	ENST00000511425	OBSCN	Q5VST9	7968 aa		3.27	□□□□□ -1.89
IFT122-222	ENST00000511425	KRTAP5-2	Q701N4	177 aa		3.27	□□□□□ -1.89
IFT122-222	ENST00000511425	AHNAK2	Q8IVF2	5795 aa		3.2	□□□□□ -1.9
IFT122-222	ENST00000511425	GPR98	Q8WXG9	6306 aa		3.15	□□□□□ -1.91
IFT122-222	ENST00000511425	KRTAP5-10	Q6L8G5	202 aa		3.03	□□□□□ -1.92
IFT122-222	ENST00000511425	KRTAP4-11	Q9BYQ6	195 aa		3.01	□□□□□ -1.93
IFT122-222	ENST00000511425	LCE1E	Q5T753	118 aa		3	□□□□□ -1.93
IFT122-222	ENST00000511425	KRTAP5-8	O75690	187 aa		2.91	□□□□□ -1.94
IFT122-222	ENST00000511425	MUC5AC	P98088	5654 aa		2.89	□□□□□ -1.95
IFT122-222	ENST00000511425	KRTAP5-1	Q6L8H4	278 aa		2.88	□□□□□ -1.95
IFT122-222	ENST00000511425	KRTAP5-7	Q6L8G8	165 aa		2.85	□□□□□ -1.95
IFT122-222	ENST00000511425	LCE1B	Q5T7P3	118 aa		2.77	□□□□□ -1.97
IFT122-222	ENST00000511425	LCE1C	Q5T751	118 aa		2.76	□□□□□ -1.97
IFT122-222	ENST00000511425	KRTAP4-2	Q9BYR5	136 aa		2.76	□□□□□ -1.97
IFT122-222	ENST00000511425	LCE1F	Q5T754	118 aa		2.71	□□□□□ -1.98
IFT122-222	ENST00000511425	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.62	□□□□□ -1.99
IFT122-222	ENST00000511425	KRTAP9-9	Q9BYP9	154 aa		2.62	□□□□□ -1.99
IFT122-222	ENST00000511425	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.62	□□□□□ -1.99
IFT122-222	ENST00000511425	KRTAP21-2	Q3LI59	83 aa		2.54	□□□□□ -2
IFT122-222	ENST00000511425	AHNAK	Q09666	5890 aa	Known RBP	2.46	□□□□□ -2.02
IFT122-222	ENST00000511425	KRTAP21-1	Q3LI58	79 aa		2.43	□□□□□ -2.02
IFT122-222	ENST00000511425	KRTAP5-11	Q6L8G4	156 aa		2.39	□□□□□ -2.03
IFT122-222	ENST00000511425	KRTAP4-12	Q9BQ66	201 aa		2.37	□□□□□ -2.03
IFT122-222	ENST00000511425	KRTAP4-4	Q9BYR3	166 aa		2.22	□□□□□ -2.05
IFT122-222	ENST00000511425	PHGR1	C9JFL3	82 aa		2.06	□□□□□ -2.08
IFT122-222	ENST00000511425	MUC19	Q7Z5P9	8384 aa		2.01	□□□□□ -2.09
IFT122-222	ENST00000511425	MUC16	Q8WXI7	14507 aa		1.36	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 212.6 ms