RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 KRTAP9-7A8MTY7 169 aa2.97□□□□□ -1.93
SMAD1-209ENST00000511125 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
SMAD1-209ENST00000511125 KRTAP4-7Q9BYR0 210 aa2.96□□□□□ -1.94
SMAD1-209ENST00000511125 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
SMAD1-209ENST00000511125 MT1EP04732 61 aa2.92□□□□□ -1.94
SMAD1-209ENST00000511125 KRTAP23-1A1A580 65 aa2.9□□□□□ -1.94
SMAD1-209ENST00000511125 SPRR2EP22531 72 aa2.9□□□□□ -1.95
SMAD1-209ENST00000511125 SPRR2BP35325 72 aa2.9□□□□□ -1.95
SMAD1-209ENST00000511125 SPRR2AP35326 72 aa2.9□□□□□ -1.95
SMAD1-209ENST00000511125 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
SMAD1-209ENST00000511125 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
SMAD1-209ENST00000511125 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
SMAD1-209ENST00000511125 KRTAP4-3Q9BYR4 195 aa2.87□□□□□ -1.95
SMAD1-209ENST00000511125 MT1LQ93083 61 aa2.85□□□□□ -1.95
SMAD1-209ENST00000511125 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
SMAD1-209ENST00000511125 KRTAP5-3Q6L8H2 238 aa2.85□□□□□ -1.95
SMAD1-209ENST00000511125 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
SMAD1-209ENST00000511125 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
SMAD1-209ENST00000511125 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
SMAD1-209ENST00000511125 NEBP20929 6669 aa2.81□□□□□ -1.96
SMAD1-209ENST00000511125 KRTAP4-9Q9BYQ8 210 aa2.8□□□□□ -1.96
SMAD1-209ENST00000511125 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
SMAD1-209ENST00000511125 LCE3BQ5TA77 95 aa2.78□□□□□ -1.96
SMAD1-209ENST00000511125 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
SMAD1-209ENST00000511125 NDUFAF8A1L188 74 aa2.78□□□□□ -1.97
SMAD1-209ENST00000511125 SPRR2DP22532 72 aa2.78□□□□□ -1.97
SMAD1-209ENST00000511125 MT1MQ8N339 61 aa2.77□□□□□ -1.97
SMAD1-209ENST00000511125 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
SMAD1-209ENST00000511125 LCE5AQ5TCM9 118 aa2.77□□□□□ -1.97
SMAD1-209ENST00000511125 MT1GP13640 62 aa2.76□□□□□ -1.97
SMAD1-209ENST00000511125 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
SMAD1-209ENST00000511125 KRTAP19-4Q3LI73 84 aa2.75□□□□□ -1.97
SMAD1-209ENST00000511125 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
SMAD1-209ENST00000511125 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.98
SMAD1-209ENST00000511125 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
SMAD1-209ENST00000511125 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
SMAD1-209ENST00000511125 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
SMAD1-209ENST00000511125 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
SMAD1-209ENST00000511125 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
SMAD1-209ENST00000511125 LCE4AQ5TA78 99 aa2.55□□□□□ -2
SMAD1-209ENST00000511125 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
SMAD1-209ENST00000511125 KRTAP2-2Q9BYT5 123 aa2.52□□□□□ -2.01
SMAD1-209ENST00000511125 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
SMAD1-209ENST00000511125 MT4P47944 62 aa2.51□□□□□ -2.01
SMAD1-209ENST00000511125 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
SMAD1-209ENST00000511125 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
SMAD1-209ENST00000511125 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
SMAD1-209ENST00000511125 MT1AP04731 61 aa2.39□□□□□ -2.03
SMAD1-209ENST00000511125 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
SMAD1-209ENST00000511125 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
SMAD1-209ENST00000511125 KRTAP6-2Q3LI66 62 aa2.3□□□□□ -2.04
SMAD1-209ENST00000511125 KRTAP20-2Q3LI61 65 aa2.28□□□□□ -2.04
SMAD1-209ENST00000511125 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
SMAD1-209ENST00000511125 MT3P25713 68 aa2.18□□□□□ -2.06
SMAD1-209ENST00000511125 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
SMAD1-209ENST00000511125 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
SMAD1-209ENST00000511125 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
SMAD1-209ENST00000511125 LCE1FQ5T754 118 aa2.09□□□□□ -2.08
SMAD1-209ENST00000511125 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
SMAD1-209ENST00000511125 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
SMAD1-209ENST00000511125 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SMAD1-209ENST00000511125 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
SMAD1-209ENST00000511125 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
SMAD1-209ENST00000511125 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
SMAD1-209ENST00000511125 LCE1EQ5T753 118 aa1.96□□□□□ -2.1
SMAD1-209ENST00000511125 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SMAD1-209ENST00000511125 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SMAD1-209ENST00000511125 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SMAD1-209ENST00000511125 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
SMAD1-209ENST00000511125 INE1O15225 51 aa1.88□□□□□ -2.11
SMAD1-209ENST00000511125 PRM1P04553 51 aa1.75□□□□□ -2.13
SMAD1-209ENST00000511125 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
SMAD1-209ENST00000511125 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
SMAD1-209ENST00000511125 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
SMAD1-209ENST00000511125 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
SMAD1-209ENST00000511125 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
SMAD1-209ENST00000511125 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SMAD1-209ENST00000511125 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 91.9 ms