RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
PTPN13-208ENST00000511105 ATOX1O00244 68 aa1.95□□□□□ -2.1
PTPN13-208ENST00000511105 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
PTPN13-208ENST00000511105 MT-ATP8P03928 68 aa1.94□□□□□ -2.1
PTPN13-208ENST00000511105 COA5Q86WW8 74 aa1.94□□□□□ -2.1
PTPN13-208ENST00000511105 M0QZ58 72 aa1.92□□□□□ -2.1
PTPN13-208ENST00000511105 PLAC4Q8WY50 150 aa1.91□□□□□ -2.1
PTPN13-208ENST00000511105 CRIPTQ9P021 101 aa1.91□□□□□ -2.1
PTPN13-208ENST00000511105 J3QR89 54 aa1.9□□□□□ -2.11
PTPN13-208ENST00000511105 MT1XP80297 61 aa1.9□□□□□ -2.11
PTPN13-208ENST00000511105 SNURFQ9Y675 71 aa1.9□□□□□ -2.11
PTPN13-208ENST00000511105 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
PTPN13-208ENST00000511105 H0YAA0 97 aa1.88□□□□□ -2.11
PTPN13-208ENST00000511105 KRTAP12-1P59990 96 aa1.88□□□□□ -2.11
PTPN13-208ENST00000511105 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
PTPN13-208ENST00000511105 DMAC1Q96GE9 116 aa1.88□□□□□ -2.11
PTPN13-208ENST00000511105 SPRR2FQ96RM1 72 aa1.88□□□□□ -2.11
PTPN13-208ENST00000511105 KRTAP20-1Q3LI63 56 aa1.87□□□□□ -2.11
PTPN13-208ENST00000511105 CHKB-CPT1BH3BT56 60 aa1.86□□□□□ -2.11
PTPN13-208ENST00000511105 ACYP2P14621 99 aa1.86□□□□□ -2.11
PTPN13-208ENST00000511105 SPRR2EP22531 72 aa1.85□□□□□ -2.11
PTPN13-208ENST00000511105 SPRR2BP35325 72 aa1.85□□□□□ -2.11
PTPN13-208ENST00000511105 SPRR2AP35326 72 aa1.85□□□□□ -2.11
PTPN13-208ENST00000511105 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
PTPN13-208ENST00000511105 BRK1Q8WUW1 75 aa1.85□□□□□ -2.11
PTPN13-208ENST00000511105 CYSTM1Q9H1C7 97 aa1.85□□□□□ -2.11
PTPN13-208ENST00000511105 C20orf197Q8N268 126 aa1.84□□□□□ -2.11
PTPN13-208ENST00000511105 K7ERU9 68 aa1.83□□□□□ -2.12
PTPN13-208ENST00000511105 A0A0D9SG42 100 aa1.81□□□□□ -2.12
PTPN13-208ENST00000511105 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
PTPN13-208ENST00000511105 SPTSSBQ8NFR3 76 aa1.8□□□□□ -2.12
PTPN13-208ENST00000511105 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
PTPN13-208ENST00000511105 SPRR2DP22532 72 aa1.79□□□□□ -2.12
PTPN13-208ENST00000511105 SPATA8Q6RVD6 105 aa1.79□□□□□ -2.12
PTPN13-208ENST00000511105 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
PTPN13-208ENST00000511105 SERP2Q8N6R1 65 aa1.78□□□□□ -2.12
PTPN13-208ENST00000511105 INE1O15225 51 aa1.77□□□□□ -2.13
PTPN13-208ENST00000511105 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
PTPN13-208ENST00000511105 COX7CP15954 63 aa1.75□□□□□ -2.13
PTPN13-208ENST00000511105 KRTAP2-1Q9BYU5 128 aa1.75□□□□□ -2.13
PTPN13-208ENST00000511105 SERP1Q9Y6X1 66 aa1.74□□□□□ -2.13
PTPN13-208ENST00000511105 CDC42SE1Q9NRR8 79 aa1.73□□□□□ -2.13
PTPN13-208ENST00000511105 CCDC179H3BU77 68 aa1.7□□□□□ -2.14
PTPN13-208ENST00000511105 H7BZZ5 65 aa1.7□□□□□ -2.14
PTPN13-208ENST00000511105 KRTAP19-7Q3SYF9 63 aa1.7□□□□□ -2.14
PTPN13-208ENST00000511105 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
PTPN13-208ENST00000511105 DSTQ03001 7570 aaKnown RBP1.69□□□□□ -2.14
PTPN13-208ENST00000511105 A0A1B0GU69 56 aa1.68□□□□□ -2.14
PTPN13-208ENST00000511105 MT1EP04732 61 aa1.68□□□□□ -2.14
PTPN13-208ENST00000511105 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
PTPN13-208ENST00000511105 C10orf95Q9H7T3 257 aa1.66□□□□□ -2.14
PTPN13-208ENST00000511105 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
PTPN13-208ENST00000511105 KRTAP19-3Q7Z4W3 81 aa1.65□□□□□ -2.15
PTPN13-208ENST00000511105 MT4P47944 62 aa1.61□□□□□ -2.15
PTPN13-208ENST00000511105 MT1MQ8N339 61 aa1.61□□□□□ -2.15
PTPN13-208ENST00000511105 TNP1P09430 55 aa1.6□□□□□ -2.15
PTPN13-208ENST00000511105 MT1GP13640 62 aa1.6□□□□□ -2.15
PTPN13-208ENST00000511105 MT1LQ93083 61 aa1.6□□□□□ -2.15
PTPN13-208ENST00000511105 LINC01558Q9Y6Z2 57 aa1.6□□□□□ -2.15
PTPN13-208ENST00000511105 GPR98Q8WXG9 6306 aa1.59□□□□□ -2.15
PTPN13-208ENST00000511105 PRR15LQ9BU68 103 aa1.58□□□□□ -2.16
PTPN13-208ENST00000511105 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
PTPN13-208ENST00000511105 UQCR11O14957 56 aa1.54□□□□□ -2.16
PTPN13-208ENST00000511105 ATP5EP56381 51 aaPredicted RBP1.53□□□□□ -2.16
PTPN13-208ENST00000511105 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
PTPN13-208ENST00000511105 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
PTPN13-208ENST00000511105 KRTAP20-2Q3LI61 65 aa1.44□□□□□ -2.18
PTPN13-208ENST00000511105 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
PTPN13-208ENST00000511105 KRTAP6-1Q3LI64 71 aa1.39□□□□□ -2.19
PTPN13-208ENST00000511105 MT1AP04731 61 aa1.34□□□□□ -2.19
PTPN13-208ENST00000511105 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
PTPN13-208ENST00000511105 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
PTPN13-208ENST00000511105 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
PTPN13-208ENST00000511105 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
PTPN13-208ENST00000511105 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
PTPN13-208ENST00000511105 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
PTPN13-208ENST00000511105 PRM1P04553 51 aa0.75□□□□□ -2.29
PTPN13-208ENST00000511105 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 40.6 ms