RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 TMEM258P61165 79 aa5.29□□□□□ -1.56
COL12A1-210ENST00000511023 V9GYY9 64 aa5.26□□□□□ -1.57
COL12A1-210ENST00000511023 DSTQ03001 7570 aaKnown RBP5.24□□□□□ -1.57
COL12A1-210ENST00000511023 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
COL12A1-210ENST00000511023 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
COL12A1-210ENST00000511023 TNP1P09430 55 aa5.22□□□□□ -1.57
COL12A1-210ENST00000511023 MT1GP13640 62 aa5.22□□□□□ -1.57
COL12A1-210ENST00000511023 LCE4AQ5TA78 99 aa5.22□□□□□ -1.57
COL12A1-210ENST00000511023 MT1LQ93083 61 aa5.19□□□□□ -1.58
COL12A1-210ENST00000511023 UQCR11O14957 56 aa5.17□□□□□ -1.58
COL12A1-210ENST00000511023 MT1MQ8N339 61 aa5.16□□□□□ -1.58
COL12A1-210ENST00000511023 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
COL12A1-210ENST00000511023 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
COL12A1-210ENST00000511023 KRTAP4-3Q9BYR4 195 aa5.07□□□□□ -1.6
COL12A1-210ENST00000511023 MIR22HGQ0VDD5 57 aa5.06□□□□□ -1.6
COL12A1-210ENST00000511023 PRO0628Q9UI54 55 aa5.04□□□□□ -1.6
COL12A1-210ENST00000511023 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
COL12A1-210ENST00000511023 PSPHP1O15172 72 aa5□□□□□ -1.61
COL12A1-210ENST00000511023 Q1T7F1 81 aa4.99□□□□□ -1.61
COL12A1-210ENST00000511023 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
COL12A1-210ENST00000511023 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
COL12A1-210ENST00000511023 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
COL12A1-210ENST00000511023 HMCN1Q96RW7 5635 aa4.95□□□□□ -1.62
COL12A1-210ENST00000511023 GPR98Q8WXG9 6306 aa4.94□□□□□ -1.62
COL12A1-210ENST00000511023 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
COL12A1-210ENST00000511023 MT4P47944 62 aa4.91□□□□□ -1.62
COL12A1-210ENST00000511023 K7ERS5 55 aa4.9□□□□□ -1.63
COL12A1-210ENST00000511023 KRTAP5-4Q6L8H1 288 aa4.9□□□□□ -1.63
COL12A1-210ENST00000511023 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
COL12A1-210ENST00000511023 A6NED7 52 aa4.81□□□□□ -1.64
COL12A1-210ENST00000511023 PMAIP1Q13794 54 aa4.81□□□□□ -1.64
COL12A1-210ENST00000511023 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
COL12A1-210ENST00000511023 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
COL12A1-210ENST00000511023 KRTAP5-5Q701N2 237 aaPredicted RBP4.74□□□□□ -1.65
COL12A1-210ENST00000511023 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
COL12A1-210ENST00000511023 CDC42SE1Q9NRR8 79 aa4.68□□□□□ -1.66
COL12A1-210ENST00000511023 ROMO1P60602 79 aa4.64□□□□□ -1.67
COL12A1-210ENST00000511023 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
COL12A1-210ENST00000511023 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
COL12A1-210ENST00000511023 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
COL12A1-210ENST00000511023 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
COL12A1-210ENST00000511023 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
COL12A1-210ENST00000511023 BRK1Q8WUW1 75 aa4.56□□□□□ -1.68
COL12A1-210ENST00000511023 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
COL12A1-210ENST00000511023 KTN1-AS1Q86SY8 53 aa4.53□□□□□ -1.68
COL12A1-210ENST00000511023 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
COL12A1-210ENST00000511023 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
COL12A1-210ENST00000511023 MT1AP04731 61 aa4.4□□□□□ -1.71
COL12A1-210ENST00000511023 KRTAP6-1Q3LI64 71 aa4.4□□□□□ -1.71
COL12A1-210ENST00000511023 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
COL12A1-210ENST00000511023 KRTAP5-2Q701N4 177 aa4.31□□□□□ -1.72
COL12A1-210ENST00000511023 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
COL12A1-210ENST00000511023 PRAC1Q96KF2 57 aa4.09□□□□□ -1.75
COL12A1-210ENST00000511023 KRTAP5-8O75690 187 aa4.07□□□□□ -1.76
COL12A1-210ENST00000511023 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
COL12A1-210ENST00000511023 MT3P25713 68 aa4□□□□□ -1.77
COL12A1-210ENST00000511023 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
COL12A1-210ENST00000511023 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
COL12A1-210ENST00000511023 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
COL12A1-210ENST00000511023 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
COL12A1-210ENST00000511023 KRTAP5-1Q6L8H4 278 aa3.86□□□□□ -1.79
COL12A1-210ENST00000511023 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
COL12A1-210ENST00000511023 NDUFAF8A1L188 74 aa3.65□□□□□ -1.83
COL12A1-210ENST00000511023 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
COL12A1-210ENST00000511023 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
COL12A1-210ENST00000511023 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
COL12A1-210ENST00000511023 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
COL12A1-210ENST00000511023 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
COL12A1-210ENST00000511023 INE1O15225 51 aa3.25□□□□□ -1.89
COL12A1-210ENST00000511023 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
COL12A1-210ENST00000511023 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
COL12A1-210ENST00000511023 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
COL12A1-210ENST00000511023 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
COL12A1-210ENST00000511023 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
COL12A1-210ENST00000511023 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
COL12A1-210ENST00000511023 PRM1P04553 51 aa2.39□□□□□ -2.03
COL12A1-210ENST00000511023 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
COL12A1-210ENST00000511023 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 81 ms