RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 MT1LQ93083 61 aa3.07□□□□□ -1.92
PDGFC-206ENST00000510982 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
PDGFC-206ENST00000510982 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
PDGFC-206ENST00000510982 AHNAK2Q8IVF2 5795 aa3.04□□□□□ -1.92
PDGFC-206ENST00000510982 KRTAP4-3Q9BYR4 195 aa3.03□□□□□ -1.92
PDGFC-206ENST00000510982 A0A1B0GU69 56 aa3.02□□□□□ -1.93
PDGFC-206ENST00000510982 COX7CP15954 63 aa3.02□□□□□ -1.93
PDGFC-206ENST00000510982 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
PDGFC-206ENST00000510982 A8MU10 97 aa3.01□□□□□ -1.93
PDGFC-206ENST00000510982 TNP1P09430 55 aa3.01□□□□□ -1.93
PDGFC-206ENST00000510982 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
PDGFC-206ENST00000510982 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
PDGFC-206ENST00000510982 H7BZZ5 65 aa3□□□□□ -1.93
PDGFC-206ENST00000510982 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
PDGFC-206ENST00000510982 KRTAP5-4Q6L8H1 288 aa2.99□□□□□ -1.93
PDGFC-206ENST00000510982 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
PDGFC-206ENST00000510982 KRTAP15-1Q3LI76 137 aa2.93□□□□□ -1.94
PDGFC-206ENST00000510982 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
PDGFC-206ENST00000510982 SVIPQ8NHG7 77 aa2.89□□□□□ -1.95
PDGFC-206ENST00000510982 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
PDGFC-206ENST00000510982 ANAPC13Q9BS18 74 aa2.85□□□□□ -1.95
PDGFC-206ENST00000510982 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
PDGFC-206ENST00000510982 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
PDGFC-206ENST00000510982 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
PDGFC-206ENST00000510982 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
PDGFC-206ENST00000510982 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
PDGFC-206ENST00000510982 CCDC179H3BU77 68 aa2.8□□□□□ -1.96
PDGFC-206ENST00000510982 UQCR11O14957 56 aa2.79□□□□□ -1.96
PDGFC-206ENST00000510982 ATP5EP56381 51 aaPredicted RBP2.79□□□□□ -1.96
PDGFC-206ENST00000510982 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
PDGFC-206ENST00000510982 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
PDGFC-206ENST00000510982 KRTAP5-1Q6L8H4 278 aa2.74□□□□□ -1.97
PDGFC-206ENST00000510982 MIR22HGQ0VDD5 57 aa2.72□□□□□ -1.97
PDGFC-206ENST00000510982 K7ERS5 55 aa2.71□□□□□ -1.98
PDGFC-206ENST00000510982 SYNE1Q8NF91 8797 aaKnown RBP2.7□□□□□ -1.98
PDGFC-206ENST00000510982 TMEM258P61165 79 aa2.67□□□□□ -1.98
PDGFC-206ENST00000510982 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
PDGFC-206ENST00000510982 KRTAP23-1A1A580 65 aa2.65□□□□□ -1.99
PDGFC-206ENST00000510982 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
PDGFC-206ENST00000510982 PSPHP1O15172 72 aa2.6□□□□□ -1.99
PDGFC-206ENST00000510982 MT1AP04731 61 aa2.6□□□□□ -1.99
PDGFC-206ENST00000510982 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
PDGFC-206ENST00000510982 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
PDGFC-206ENST00000510982 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
PDGFC-206ENST00000510982 V9GYY9 64 aa2.58□□□□□ -2
PDGFC-206ENST00000510982 MUC5ACP98088 5654 aa2.58□□□□□ -2
PDGFC-206ENST00000510982 Q1T7F1 81 aa2.55□□□□□ -2
PDGFC-206ENST00000510982 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
PDGFC-206ENST00000510982 KRTAP5-8O75690 187 aa2.54□□□□□ -2
PDGFC-206ENST00000510982 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
PDGFC-206ENST00000510982 RPS28P62857 69 aaKnown RBP2.52□□□□□ -2.01
PDGFC-206ENST00000510982 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
PDGFC-206ENST00000510982 A6NED7 52 aa2.5□□□□□ -2.01
PDGFC-206ENST00000510982 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
PDGFC-206ENST00000510982 ROMO1P60602 79 aa2.48□□□□□ -2.01
PDGFC-206ENST00000510982 MT3P25713 68 aa2.41□□□□□ -2.02
PDGFC-206ENST00000510982 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
PDGFC-206ENST00000510982 PCP4P48539 62 aa2.38□□□□□ -2.03
PDGFC-206ENST00000510982 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
PDGFC-206ENST00000510982 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
PDGFC-206ENST00000510982 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
PDGFC-206ENST00000510982 BRK1Q8WUW1 75 aa1.99□□□□□ -2.09
PDGFC-206ENST00000510982 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
PDGFC-206ENST00000510982 PRO0628Q9UI54 55 aa1.91□□□□□ -2.1
PDGFC-206ENST00000510982 PRAC1Q96KF2 57 aa1.89□□□□□ -2.11
PDGFC-206ENST00000510982 PMAIP1Q13794 54 aa1.87□□□□□ -2.11
PDGFC-206ENST00000510982 LCE1FQ5T754 118 aa1.85□□□□□ -2.11
PDGFC-206ENST00000510982 LCE3EQ5T5B0 92 aa1.78□□□□□ -2.12
PDGFC-206ENST00000510982 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PDGFC-206ENST00000510982 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
PDGFC-206ENST00000510982 KTN1-AS1Q86SY8 53 aa1.71□□□□□ -2.14
PDGFC-206ENST00000510982 NDUFAF8A1L188 74 aa1.68□□□□□ -2.14
PDGFC-206ENST00000510982 LUZP6Q538Z0 58 aa1.63□□□□□ -2.15
PDGFC-206ENST00000510982 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
PDGFC-206ENST00000510982 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
PDGFC-206ENST00000510982 PRM1P04553 51 aa1.26□□□□□ -2.21
PDGFC-206ENST00000510982 INE1O15225 51 aa1.21□□□□□ -2.22
PDGFC-206ENST00000510982 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 60.7 ms