RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
USP53-206ENST00000510737 KRTAP25-1Q3LHN0 102 aa1.72□□□□□ -2.13
USP53-206ENST00000510737 TP53AIP1Q9HCN2 124 aa1.72□□□□□ -2.13
USP53-206ENST00000510737 A6NED7 52 aa1.71□□□□□ -2.14
USP53-206ENST00000510737 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
USP53-206ENST00000510737 KRTAP6-1Q3LI64 71 aa1.7□□□□□ -2.14
USP53-206ENST00000510737 TRAV22A0A0B4J277 110 aa1.69□□□□□ -2.14
USP53-206ENST00000510737 LOC101927531A0A1B0GV80 90 aa1.68□□□□□ -2.14
USP53-206ENST00000510737 KRTAP12-1P59990 96 aa1.66□□□□□ -2.14
USP53-206ENST00000510737 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
USP53-206ENST00000510737 A0A1B0GU33 70 aa1.65□□□□□ -2.15
USP53-206ENST00000510737 MT1AP04731 61 aa1.65□□□□□ -2.15
USP53-206ENST00000510737 MP68P56378 58 aa1.64□□□□□ -2.15
USP53-206ENST00000510737 ATXN8Q156A1 80 aa1.64□□□□□ -2.15
USP53-206ENST00000510737 SPATA45Q537H7 98 aa1.61□□□□□ -2.15
USP53-206ENST00000510737 VAMP8Q9BV40 100 aa1.61□□□□□ -2.15
USP53-206ENST00000510737 HSD52Q0P140 79 aa1.59□□□□□ -2.15
USP53-206ENST00000510737 SPCS1Q9Y6A9 102 aa1.57□□□□□ -2.16
USP53-206ENST00000510737 H0Y9P7 68 aa1.55□□□□□ -2.16
USP53-206ENST00000510737 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
USP53-206ENST00000510737 ATOX1O00244 68 aa1.52□□□□□ -2.17
USP53-206ENST00000510737 UBL5Q9BZL1 73 aa1.52□□□□□ -2.17
USP53-206ENST00000510737 DMAC1Q96GE9 116 aa1.51□□□□□ -2.17
USP53-206ENST00000510737 TSTD3H0UI37 97 aa1.5□□□□□ -2.17
USP53-206ENST00000510737 UQCRQO14949 82 aa1.5□□□□□ -2.17
USP53-206ENST00000510737 LINC00208Q96KT6 92 aa1.5□□□□□ -2.17
USP53-206ENST00000510737 TNP1P09430 55 aa1.48□□□□□ -2.17
USP53-206ENST00000510737 H3BPC8 53 aa1.47□□□□□ -2.17
USP53-206ENST00000510737 H3BT86 120 aa1.47□□□□□ -2.17
USP53-206ENST00000510737 S100A6P06703 90 aa1.46□□□□□ -2.18
USP53-206ENST00000510737 TRAV7A0A075B6U4 112 aa1.45□□□□□ -2.18
USP53-206ENST00000510737 TAX1BP3O14907 124 aa1.43□□□□□ -2.18
USP53-206ENST00000510737 S100A1P23297 94 aa1.43□□□□□ -2.18
USP53-206ENST00000510737 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
USP53-206ENST00000510737 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
USP53-206ENST00000510737 UQCR10Q9UDW1 63 aa1.4□□□□□ -2.19
USP53-206ENST00000510737 ACYP2P14621 99 aa1.38□□□□□ -2.19
USP53-206ENST00000510737 TMEM258P61165 79 aa1.36□□□□□ -2.19
USP53-206ENST00000510737 PYY3Q5JQD4 70 aa1.35□□□□□ -2.19
USP53-206ENST00000510737 HIST1H4AP62805 103 aaKnown RBP1.32□□□□□ -2.2
USP53-206ENST00000510737 CHKB-CPT1BH3BT56 60 aa1.31□□□□□ -2.2
USP53-206ENST00000510737 M0R143 59 aa1.31□□□□□ -2.2
USP53-206ENST00000510737 COA5Q86WW8 74 aa1.31□□□□□ -2.2
USP53-206ENST00000510737 KTN1-AS1Q86SY8 53 aa1.29□□□□□ -2.2
USP53-206ENST00000510737 SCGB1A1P11684 91 aa1.25□□□□□ -2.21
USP53-206ENST00000510737 SERP1Q9Y6X1 66 aa1.22□□□□□ -2.21
USP53-206ENST00000510737 ATP5EP2Q5VTU8 51 aa1.21□□□□□ -2.22
USP53-206ENST00000510737 PMAIP1Q13794 54 aa1.18□□□□□ -2.22
USP53-206ENST00000510737 Q1T7F1 81 aa1.18□□□□□ -2.22
USP53-206ENST00000510737 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
USP53-206ENST00000510737 ETDBQ3ZM63 59 aa1.16□□□□□ -2.22
USP53-206ENST00000510737 SNURFQ9Y675 71 aa1.12□□□□□ -2.23
USP53-206ENST00000510737 LINC00643Q86TS7 51 aa1.1□□□□□ -2.23
USP53-206ENST00000510737 F8W1H4 67 aa1.09□□□□□ -2.23
USP53-206ENST00000510737 SERP2Q8N6R1 65 aa1.08□□□□□ -2.24
USP53-206ENST00000510737 H7BZZ5 65 aa1.04□□□□□ -2.24
USP53-206ENST00000510737 A0A1B0GU69 56 aa1.01□□□□□ -2.25
USP53-206ENST00000510737 GTF2H5Q6ZYL4 71 aa0.99□□□□□ -2.25
USP53-206ENST00000510737 COL5A1-AS1Q5SY13 56 aa0.96□□□□□ -2.26
USP53-206ENST00000510737 PRR15LQ9BU68 103 aa0.93□□□□□ -2.26
USP53-206ENST00000510737 SMIM6P0DI80 62 aa0.91□□□□□ -2.26
USP53-206ENST00000510737 CDC42SE1Q9NRR8 79 aa0.91□□□□□ -2.26
USP53-206ENST00000510737 RPS28P62857 69 aaKnown RBP0.9□□□□□ -2.27
USP53-206ENST00000510737 SMIM20Q8N5G0 67 aa0.9□□□□□ -2.27
USP53-206ENST00000510737 INE1O15225 51 aa0.89□□□□□ -2.27
USP53-206ENST00000510737 ROMO1P60602 79 aa0.8□□□□□ -2.28
USP53-206ENST00000510737 UQCR11O14957 56 aa0.79□□□□□ -2.28
USP53-206ENST00000510737 COX7CP15954 63 aa0.77□□□□□ -2.29
USP53-206ENST00000510737 MIR22HGQ0VDD5 57 aa0.74□□□□□ -2.29
USP53-206ENST00000510737 LINC01558Q9Y6Z2 57 aa0.74□□□□□ -2.29
USP53-206ENST00000510737 LOC105371267A0A1B0GV96 52 aa0.67□□□□□ -2.3
USP53-206ENST00000510737 J3QR89 54 aa0.67□□□□□ -2.3
USP53-206ENST00000510737 A0A1B0GV90 55 aa0.55□□□□□ -2.32
USP53-206ENST00000510737 BRK1Q8WUW1 75 aa0.46□□□□□ -2.34
USP53-206ENST00000510737 K7ERU9 68 aa0.43□□□□□ -2.34
USP53-206ENST00000510737 ATP5EP56381 51 aaPredicted RBP0.4□□□□□ -2.35
USP53-206ENST00000510737 CCDC179H3BU77 68 aa0.35□□□□□ -2.35
USP53-206ENST00000510737 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 100.5 ms