RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 KRTAP5-4Q6L8H1 288 aa9.2□□□□□ -0.94
SNF8-208ENST00000510195 KRTAP4-3Q9BYR4 195 aa9.18□□□□□ -0.94
SNF8-208ENST00000510195 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
SNF8-208ENST00000510195 LINC01558Q9Y6Z2 57 aa9.1□□□□□ -0.95
SNF8-208ENST00000510195 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
SNF8-208ENST00000510195 AHNAK2Q8IVF2 5795 aa9.05□□□□□ -0.96
SNF8-208ENST00000510195 KRTAP12-3P60328 96 aa9.04□□□□□ -0.96
SNF8-208ENST00000510195 KRTAP4-6Q9BYQ5 205 aa8.99□□□□□ -0.97
SNF8-208ENST00000510195 UQCR11O14957 56 aa8.96□□□□□ -0.98
SNF8-208ENST00000510195 KRTAP4-7Q9BYR0 210 aa8.92□□□□□ -0.98
SNF8-208ENST00000510195 KRTAP5-10Q6L8G5 202 aa8.87□□□□□ -0.99
SNF8-208ENST00000510195 TMEM258P61165 79 aa8.8□□□□□ -1
SNF8-208ENST00000510195 KRTAP25-1Q3LHN0 102 aa8.79□□□□□ -1
SNF8-208ENST00000510195 KRTAP5-5Q701N2 237 aaPredicted RBP8.73□□□□□ -1.01
SNF8-208ENST00000510195 MIR22HGQ0VDD5 57 aa8.69□□□□□ -1.02
SNF8-208ENST00000510195 KRTAP19-4Q3LI73 84 aa8.68□□□□□ -1.02
SNF8-208ENST00000510195 KRTAP20-2Q3LI61 65 aa8.67□□□□□ -1.02
SNF8-208ENST00000510195 SPRR5A0A1B0GTR4 108 aa8.66□□□□□ -1.02
SNF8-208ENST00000510195 K7ERS5 55 aa8.63□□□□□ -1.03
SNF8-208ENST00000510195 KRTAP5-3Q6L8H2 238 aa8.62□□□□□ -1.03
SNF8-208ENST00000510195 KRTAP12-4P60329 112 aa8.59□□□□□ -1.03
SNF8-208ENST00000510195 KRTAP5-7Q6L8G8 165 aa8.58□□□□□ -1.04
SNF8-208ENST00000510195 KRTAP23-1A1A580 65 aa8.51□□□□□ -1.05
SNF8-208ENST00000510195 SYNE1Q8NF91 8797 aaKnown RBP8.47□□□□□ -1.05
SNF8-208ENST00000510195 LOC100996750A0A140TA64 210 aa8.47□□□□□ -1.05
SNF8-208ENST00000510195 V9GYY9 64 aa8.45□□□□□ -1.06
SNF8-208ENST00000510195 KRTAP15-1Q3LI76 137 aa8.39□□□□□ -1.07
SNF8-208ENST00000510195 PSPHP1O15172 72 aa8.35□□□□□ -1.07
SNF8-208ENST00000510195 Q1T7F1 81 aa8.33□□□□□ -1.08
SNF8-208ENST00000510195 LCE3CQ5T5A8 94 aa8.32□□□□□ -1.08
SNF8-208ENST00000510195 CDC42SE1Q9NRR8 79 aa8.11□□□□□ -1.11
SNF8-208ENST00000510195 A6NED7 52 aa8.08□□□□□ -1.12
SNF8-208ENST00000510195 MT1AP04731 61 aa8.07□□□□□ -1.12
SNF8-208ENST00000510195 KRTAP5-2Q701N4 177 aa8.02□□□□□ -1.13
SNF8-208ENST00000510195 KRTAP6-1Q3LI64 71 aa8□□□□□ -1.13
SNF8-208ENST00000510195 KRTAP4-11Q9BYQ6 195 aa7.98□□□□□ -1.13
SNF8-208ENST00000510195 RPS28P62857 69 aaKnown RBP7.96□□□□□ -1.14
SNF8-208ENST00000510195 ROMO1P60602 79 aa7.95□□□□□ -1.14
SNF8-208ENST00000510195 KRTAP9-4Q9BYQ2 154 aa7.83□□□□□ -1.16
SNF8-208ENST00000510195 KRTAP9-6A8MVA2 160 aa7.8□□□□□ -1.16
SNF8-208ENST00000510195 KRTAP5-8O75690 187 aa7.7□□□□□ -1.18
SNF8-208ENST00000510195 KRTAP6-2Q3LI66 62 aa7.69□□□□□ -1.18
SNF8-208ENST00000510195 OBSCNQ5VST9 7968 aa7.59□□□□□ -1.19
SNF8-208ENST00000510195 MUC5BQ9HC84 5762 aaPredicted RBP7.51□□□□□ -1.21
SNF8-208ENST00000510195 AHNAKQ09666 5890 aaKnown RBP7.48□□□□□ -1.21
SNF8-208ENST00000510195 MUC5ACP98088 5654 aa7.47□□□□□ -1.21
SNF8-208ENST00000510195 MT3P25713 68 aa7.42□□□□□ -1.22
SNF8-208ENST00000510195 KRTAP9-9Q9BYP9 154 aa7.37□□□□□ -1.23
SNF8-208ENST00000510195 KRTAP5-1Q6L8H4 278 aa7.22□□□□□ -1.25
SNF8-208ENST00000510195 PCP4P48539 62 aa7.17□□□□□ -1.26
SNF8-208ENST00000510195 LCE1EQ5T753 118 aa6.9□□□□□ -1.3
SNF8-208ENST00000510195 BRK1Q8WUW1 75 aa6.6□□□□□ -1.35
SNF8-208ENST00000510195 KRTAP4-2Q9BYR5 136 aa6.46□□□□□ -1.38
SNF8-208ENST00000510195 LCE1BQ5T7P3 118 aa6.41□□□□□ -1.38
SNF8-208ENST00000510195 LCE1CQ5T751 118 aa6.4□□□□□ -1.38
SNF8-208ENST00000510195 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
SNF8-208ENST00000510195 PRAC1Q96KF2 57 aa5.99□□□□□ -1.45
SNF8-208ENST00000510195 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.46
SNF8-208ENST00000510195 KRTAP4-12Q9BQ66 201 aa5.87□□□□□ -1.47
SNF8-208ENST00000510195 KRTAP5-11Q6L8G4 156 aa5.8□□□□□ -1.48
SNF8-208ENST00000510195 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.8□□□□□ -1.48
SNF8-208ENST00000510195 LCE1FQ5T754 118 aa5.74□□□□□ -1.49
SNF8-208ENST00000510195 LCE3EQ5T5B0 92 aa5.57□□□□□ -1.52
SNF8-208ENST00000510195 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
SNF8-208ENST00000510195 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
SNF8-208ENST00000510195 SVIPQ8NHG7 77 aa5.31□□□□□ -1.56
SNF8-208ENST00000510195 KRTAP21-2Q3LI59 83 aa5.29□□□□□ -1.56
SNF8-208ENST00000510195 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
SNF8-208ENST00000510195 PHGR1C9JFL3 82 aa5.16□□□□□ -1.58
SNF8-208ENST00000510195 KRTAP4-4Q9BYR3 166 aa4.8□□□□□ -1.64
SNF8-208ENST00000510195 MUC19Q7Z5P9 8384 aa4.7□□□□□ -1.66
SNF8-208ENST00000510195 H3BS24 57 aa4.18□□□□□ -1.74
SNF8-208ENST00000510195 PRM1P04553 51 aa4.01□□□□□ -1.77
SNF8-208ENST00000510195 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
SNF8-208ENST00000510195 KRTAP21-1Q3LI58 79 aa3.96□□□□□ -1.78
SNF8-208ENST00000510195 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
SNF8-208ENST00000510195 MUC16Q8WXI7 14507 aa3.33□□□□□ -1.88
SNF8-208ENST00000510195 INE1O15225 51 aa3.02□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 496.8 ms