RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
DDX41-211ENST00000510171 A8MU10 97 aa3.65□□□□□ -1.83
DDX41-211ENST00000510171 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
DDX41-211ENST00000510171 TNP1P09430 55 aa3.63□□□□□ -1.83
DDX41-211ENST00000510171 TMEM258P61165 79 aa3.63□□□□□ -1.83
DDX41-211ENST00000510171 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
DDX41-211ENST00000510171 PRR15LQ9BU68 103 aa3.63□□□□□ -1.83
DDX41-211ENST00000510171 ATP5EP56381 51 aaPredicted RBP3.61□□□□□ -1.83
DDX41-211ENST00000510171 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
DDX41-211ENST00000510171 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
DDX41-211ENST00000510171 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
DDX41-211ENST00000510171 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
DDX41-211ENST00000510171 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
DDX41-211ENST00000510171 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
DDX41-211ENST00000510171 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
DDX41-211ENST00000510171 UQCR11O14957 56 aa3.49□□□□□ -1.85
DDX41-211ENST00000510171 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
DDX41-211ENST00000510171 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
DDX41-211ENST00000510171 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
DDX41-211ENST00000510171 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
DDX41-211ENST00000510171 KRTAP25-1Q3LHN0 102 aa3.4□□□□□ -1.87
DDX41-211ENST00000510171 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
DDX41-211ENST00000510171 K7ERS5 55 aa3.38□□□□□ -1.87
DDX41-211ENST00000510171 V9GYY9 64 aa3.37□□□□□ -1.87
DDX41-211ENST00000510171 Q1T7F1 81 aa3.36□□□□□ -1.87
DDX41-211ENST00000510171 KRTAP19-4Q3LI73 84 aa3.33□□□□□ -1.88
DDX41-211ENST00000510171 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
DDX41-211ENST00000510171 PSPHP1O15172 72 aa3.29□□□□□ -1.88
DDX41-211ENST00000510171 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
DDX41-211ENST00000510171 KRTAP4-11Q9BYQ6 195 aa3.28□□□□□ -1.88
DDX41-211ENST00000510171 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
DDX41-211ENST00000510171 A6NED7 52 aa3.21□□□□□ -1.9
DDX41-211ENST00000510171 SYNE1Q8NF91 8797 aaKnown RBP3.2□□□□□ -1.9
DDX41-211ENST00000510171 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
DDX41-211ENST00000510171 KRTAP5-2Q701N4 177 aa3.19□□□□□ -1.9
DDX41-211ENST00000510171 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
DDX41-211ENST00000510171 CDC42SE1Q9NRR8 79 aa3.17□□□□□ -1.9
DDX41-211ENST00000510171 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
DDX41-211ENST00000510171 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
DDX41-211ENST00000510171 MT1AP04731 61 aa3.12□□□□□ -1.91
DDX41-211ENST00000510171 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
DDX41-211ENST00000510171 ROMO1P60602 79 aa3.11□□□□□ -1.91
DDX41-211ENST00000510171 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
DDX41-211ENST00000510171 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
DDX41-211ENST00000510171 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
DDX41-211ENST00000510171 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
DDX41-211ENST00000510171 MUC5BQ9HC84 5762 aaPredicted RBP3.05□□□□□ -1.92
DDX41-211ENST00000510171 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
DDX41-211ENST00000510171 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
DDX41-211ENST00000510171 KRTAP9-6A8MVA2 160 aa2.98□□□□□ -1.93
DDX41-211ENST00000510171 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
DDX41-211ENST00000510171 SVIPQ8NHG7 77 aa2.94□□□□□ -1.94
DDX41-211ENST00000510171 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
DDX41-211ENST00000510171 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.95
DDX41-211ENST00000510171 MT3P25713 68 aa2.89□□□□□ -1.95
DDX41-211ENST00000510171 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
DDX41-211ENST00000510171 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
DDX41-211ENST00000510171 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
DDX41-211ENST00000510171 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
DDX41-211ENST00000510171 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
DDX41-211ENST00000510171 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
DDX41-211ENST00000510171 LUZP6Q538Z0 58 aa2.32□□□□□ -2.04
DDX41-211ENST00000510171 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
DDX41-211ENST00000510171 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
DDX41-211ENST00000510171 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
DDX41-211ENST00000510171 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
DDX41-211ENST00000510171 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
DDX41-211ENST00000510171 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
DDX41-211ENST00000510171 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
DDX41-211ENST00000510171 H3BS24 57 aa2.06□□□□□ -2.08
DDX41-211ENST00000510171 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
DDX41-211ENST00000510171 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
DDX41-211ENST00000510171 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
DDX41-211ENST00000510171 INE1O15225 51 aa1.9□□□□□ -2.11
DDX41-211ENST00000510171 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
DDX41-211ENST00000510171 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
DDX41-211ENST00000510171 PRM1P04553 51 aa1.56□□□□□ -2.16
DDX41-211ENST00000510171 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms