RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 KRTAP19-3Q7Z4W3 81 aa7.87□□□□□ -1.15
UBE2D3-229ENST00000510129 KRTAP4-7Q9BYR0 210 aa7.83□□□□□ -1.16
UBE2D3-229ENST00000510129 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
UBE2D3-229ENST00000510129 KRTAP19-5Q3LI72 72 aa7.81□□□□□ -1.16
UBE2D3-229ENST00000510129 KRTAP4-9Q9BYQ8 210 aa7.76□□□□□ -1.17
UBE2D3-229ENST00000510129 V9GYY9 64 aa7.74□□□□□ -1.17
UBE2D3-229ENST00000510129 MT1GP13640 62 aa7.73□□□□□ -1.17
UBE2D3-229ENST00000510129 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
UBE2D3-229ENST00000510129 MIR22HGQ0VDD5 57 aa7.69□□□□□ -1.18
UBE2D3-229ENST00000510129 LCE3AQ5TA76 89 aa7.68□□□□□ -1.18
UBE2D3-229ENST00000510129 K7ERS5 55 aa7.64□□□□□ -1.19
UBE2D3-229ENST00000510129 Q1T7F1 81 aa7.6□□□□□ -1.19
UBE2D3-229ENST00000510129 MT1LQ93083 61 aa7.59□□□□□ -1.19
UBE2D3-229ENST00000510129 PSPHP1O15172 72 aa7.54□□□□□ -1.2
UBE2D3-229ENST00000510129 MT1MQ8N339 61 aa7.54□□□□□ -1.2
UBE2D3-229ENST00000510129 KRTAP4-11Q9BYQ6 195 aa7.54□□□□□ -1.2
UBE2D3-229ENST00000510129 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
UBE2D3-229ENST00000510129 DSTQ03001 7570 aaKnown RBP7.49□□□□□ -1.21
UBE2D3-229ENST00000510129 KRTAP12-3P60328 96 aa7.46□□□□□ -1.22
UBE2D3-229ENST00000510129 KRTAP4-2Q9BYR5 136 aa7.45□□□□□ -1.22
UBE2D3-229ENST00000510129 A6NED7 52 aa7.36□□□□□ -1.23
UBE2D3-229ENST00000510129 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
UBE2D3-229ENST00000510129 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
UBE2D3-229ENST00000510129 KRTAP4-3Q9BYR4 195 aa7.26□□□□□ -1.25
UBE2D3-229ENST00000510129 PCP4P48539 62 aa7.2□□□□□ -1.26
UBE2D3-229ENST00000510129 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
UBE2D3-229ENST00000510129 KRTAP5-4Q6L8H1 288 aa7.15□□□□□ -1.26
UBE2D3-229ENST00000510129 MT4P47944 62 aa7.12□□□□□ -1.27
UBE2D3-229ENST00000510129 ROMO1P60602 79 aa7.04□□□□□ -1.28
UBE2D3-229ENST00000510129 SVIPQ8NHG7 77 aa7.01□□□□□ -1.29
UBE2D3-229ENST00000510129 HMCN1Q96RW7 5635 aa6.92□□□□□ -1.3
UBE2D3-229ENST00000510129 GPR98Q8WXG9 6306 aa6.92□□□□□ -1.3
UBE2D3-229ENST00000510129 KRTAP5-5Q701N2 237 aaPredicted RBP6.9□□□□□ -1.3
UBE2D3-229ENST00000510129 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
UBE2D3-229ENST00000510129 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
UBE2D3-229ENST00000510129 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
UBE2D3-229ENST00000510129 KRTAP20-2Q3LI61 65 aa6.72□□□□□ -1.33
UBE2D3-229ENST00000510129 KRTAP5-10Q6L8G5 202 aa6.63□□□□□ -1.35
UBE2D3-229ENST00000510129 AHNAK2Q8IVF2 5795 aa6.56□□□□□ -1.36
UBE2D3-229ENST00000510129 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
UBE2D3-229ENST00000510129 MT1AP04731 61 aa6.49□□□□□ -1.37
UBE2D3-229ENST00000510129 SYNE1Q8NF91 8797 aaKnown RBP6.46□□□□□ -1.37
UBE2D3-229ENST00000510129 KRTAP5-7Q6L8G8 165 aa6.4□□□□□ -1.38
UBE2D3-229ENST00000510129 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
UBE2D3-229ENST00000510129 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
UBE2D3-229ENST00000510129 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
UBE2D3-229ENST00000510129 A0A0A0MQY5 61 aa6.29□□□□□ -1.4
UBE2D3-229ENST00000510129 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
UBE2D3-229ENST00000510129 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
UBE2D3-229ENST00000510129 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
UBE2D3-229ENST00000510129 MT3P25713 68 aa5.97□□□□□ -1.45
UBE2D3-229ENST00000510129 KRTAP5-8O75690 187 aa5.89□□□□□ -1.47
UBE2D3-229ENST00000510129 PRAC1Q96KF2 57 aa5.68□□□□□ -1.5
UBE2D3-229ENST00000510129 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
UBE2D3-229ENST00000510129 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
UBE2D3-229ENST00000510129 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
UBE2D3-229ENST00000510129 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
UBE2D3-229ENST00000510129 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
UBE2D3-229ENST00000510129 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
UBE2D3-229ENST00000510129 KTN1-AS1Q86SY8 53 aa5.38□□□□□ -1.55
UBE2D3-229ENST00000510129 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.55
UBE2D3-229ENST00000510129 NDUFAF8A1L188 74 aa5.14□□□□□ -1.59
UBE2D3-229ENST00000510129 LCE1FQ5T754 118 aa5.08□□□□□ -1.6
UBE2D3-229ENST00000510129 LCE1BQ5T7P3 118 aa5.07□□□□□ -1.6
UBE2D3-229ENST00000510129 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
UBE2D3-229ENST00000510129 KRTAP5-11Q6L8G4 156 aa5.05□□□□□ -1.6
UBE2D3-229ENST00000510129 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
UBE2D3-229ENST00000510129 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
UBE2D3-229ENST00000510129 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
UBE2D3-229ENST00000510129 LCE3EQ5T5B0 92 aa4.73□□□□□ -1.65
UBE2D3-229ENST00000510129 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.74
UBE2D3-229ENST00000510129 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
UBE2D3-229ENST00000510129 PHGR1C9JFL3 82 aa3.93□□□□□ -1.78
UBE2D3-229ENST00000510129 PRM1P04553 51 aa3.55□□□□□ -1.84
UBE2D3-229ENST00000510129 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
UBE2D3-229ENST00000510129 INE1O15225 51 aa3.26□□□□□ -1.89
UBE2D3-229ENST00000510129 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
UBE2D3-229ENST00000510129 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms