RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 SPRR2GQ9BYE4 73 aa0.48□□□□□ -2.33
CAST-229ENST00000510098 ACANP16112 2415 aa0.48□□□□□ -2.33
CAST-229ENST00000510098 LRRK2Q5S007 2527 aa0.47□□□□□ -2.33
CAST-229ENST00000510098 TGP01266 2768 aa0.47□□□□□ -2.33
CAST-229ENST00000510098 CFAP46Q8IYW2 2715 aa0.47□□□□□ -2.33
CAST-229ENST00000510098 SONP18583 2426 aaKnown RBP0.47□□□□□ -2.33
CAST-229ENST00000510098 RYR3Q15413 4870 aa0.46□□□□□ -2.34
CAST-229ENST00000510098 CACNA1AO00555 2505 aa0.46□□□□□ -2.34
CAST-229ENST00000510098 HRNRQ86YZ3 2850 aaPredicted RBP0.46□□□□□ -2.34
CAST-229ENST00000510098 HERC2O95714 4834 aa0.46□□□□□ -2.34
CAST-229ENST00000510098 SPTAN1Q13813 2472 aaKnown RBP0.46□□□□□ -2.34
CAST-229ENST00000510098 DOPEY1Q5JWR5 2465 aa0.46□□□□□ -2.34
CAST-229ENST00000510098 SPG11Q96JI7 2443 aa0.46□□□□□ -2.34
CAST-229ENST00000510098 GCN1Q92616 2671 aaKnown RBP0.45□□□□□ -2.34
CAST-229ENST00000510098 STAB2Q8WWQ8 2551 aa0.45□□□□□ -2.34
CAST-229ENST00000510098 KRTAP19-8Q3LI54 63 aa0.45□□□□□ -2.34
CAST-229ENST00000510098 USP9XQ93008 2570 aaPredicted RBP0.45□□□□□ -2.34
CAST-229ENST00000510098 MYO9AB2RTY4 2548 aa0.45□□□□□ -2.34
CAST-229ENST00000510098 TLN1Q9Y490 2541 aaKnown RBP0.45□□□□□ -2.34
CAST-229ENST00000510098 NBEAL1Q6ZS30 2694 aa0.44□□□□□ -2.34
CAST-229ENST00000510098 MTORP42345 2549 aa0.44□□□□□ -2.34
CAST-229ENST00000510098 HYDINQ4G0P3 5121 aa0.44□□□□□ -2.34
CAST-229ENST00000510098 PCLOQ9Y6V0 5065 aa0.44□□□□□ -2.34
CAST-229ENST00000510098 MT1BP07438 61 aa0.43□□□□□ -2.34
CAST-229ENST00000510098 SPRR2BP35325 72 aa0.43□□□□□ -2.34
CAST-229ENST00000510098 MT1XP80297 61 aa0.43□□□□□ -2.34
CAST-229ENST00000510098 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
CAST-229ENST00000510098 CENPEQ02224 2701 aa0.43□□□□□ -2.34
CAST-229ENST00000510098 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
CAST-229ENST00000510098 FLNBO75369 2602 aaKnown RBP0.43□□□□□ -2.34
CAST-229ENST00000510098 TEP1Q99973 2627 aaKnown RBP0.43□□□□□ -2.34
CAST-229ENST00000510098 USH2AO75445 5202 aa0.42□□□□□ -2.34
CAST-229ENST00000510098 MUC2Q02817 5179 aa0.42□□□□□ -2.34
CAST-229ENST00000510098 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
CAST-229ENST00000510098 TLN2Q9Y4G6 2542 aa0.42□□□□□ -2.34
CAST-229ENST00000510098 ANKRD11Q6UB99 2663 aaPredicted RBP0.42□□□□□ -2.34
CAST-229ENST00000510098 HMCN2Q8NDA2 5059 aa0.42□□□□□ -2.34
CAST-229ENST00000510098 MT2AP02795 61 aa0.41□□□□□ -2.34
CAST-229ENST00000510098 MT1FP04733 61 aa0.41□□□□□ -2.34
CAST-229ENST00000510098 KMT2CQ8NEZ4 4911 aaKnown RBP0.41□□□□□ -2.34
CAST-229ENST00000510098 UBR4Q5T4S7 5183 aa0.41□□□□□ -2.34
CAST-229ENST00000510098 FLNAP21333 2647 aaKnown RBP0.41□□□□□ -2.34
CAST-229ENST00000510098 MYO18BQ8IUG5 2567 aa0.4□□□□□ -2.34
CAST-229ENST00000510098 MGAM2Q2M2H8 2515 aa0.4□□□□□ -2.34
CAST-229ENST00000510098 RYR1P21817 5038 aa0.4□□□□□ -2.35
CAST-229ENST00000510098 PHGR1C9JFL3 82 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 MT1EP04732 61 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 MT1HP80294 61 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 KRTAP19-7Q3SYF9 63 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 MT1LQ93083 61 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 CEP295Q9C0D2 2601 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 ACACBO00763 2458 aa0.39□□□□□ -2.35
CAST-229ENST00000510098 MT1AP04731 61 aa0.38□□□□□ -2.35
CAST-229ENST00000510098 MAST4O15021 2626 aa0.38□□□□□ -2.35
CAST-229ENST00000510098 FASNP49327 2511 aaKnown RBP0.38□□□□□ -2.35
CAST-229ENST00000510098 RYR2Q92736 4967 aa0.37□□□□□ -2.35
CAST-229ENST00000510098 FAT4Q6V0I7 4981 aa0.37□□□□□ -2.35
CAST-229ENST00000510098 EPPK1P58107 5090 aaKnown RBP0.36□□□□□ -2.35
CAST-229ENST00000510098 KMT2DO14686 5537 aa0.36□□□□□ -2.35
CAST-229ENST00000510098 MT1GP13640 62 aa0.36□□□□□ -2.35
CAST-229ENST00000510098 ABCA13Q86UQ4 5058 aa0.35□□□□□ -2.35
CAST-229ENST00000510098 KRTAP6-2Q3LI66 62 aa0.35□□□□□ -2.35
CAST-229ENST00000510098 MT1MQ8N339 61 aa0.35□□□□□ -2.35
CAST-229ENST00000510098 SSPOA2VEC9 5147 aa0.34□□□□□ -2.35
CAST-229ENST00000510098 KIAA1109Q2LD37 5005 aa0.34□□□□□ -2.36
CAST-229ENST00000510098 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
CAST-229ENST00000510098 SPRR2AP35326 72 aa0.33□□□□□ -2.36
CAST-229ENST00000510098 SYNE2Q8WXH0 6885 aaKnown RBP0.32□□□□□ -2.36
CAST-229ENST00000510098 SPRR2EP22531 72 aa0.32□□□□□ -2.36
CAST-229ENST00000510098 KRTAP6-1Q3LI64 71 aa0.32□□□□□ -2.36
CAST-229ENST00000510098 KRTAP19-6Q3LI70 58 aa0.3□□□□□ -2.36
CAST-229ENST00000510098 FSIP2Q5CZC0 6907 aa0.28□□□□□ -2.36
CAST-229ENST00000510098 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
CAST-229ENST00000510098 DSTQ03001 7570 aaKnown RBP0.21□□□□□ -2.38
CAST-229ENST00000510098 NEBP20929 6669 aa0.21□□□□□ -2.38
CAST-229ENST00000510098 KRTAP20-2Q3LI61 65 aa0.2□□□□□ -2.38
CAST-229ENST00000510098 MT4P47944 62 aa0.17□□□□□ -2.38
CAST-229ENST00000510098 KRTAP20-1Q3LI63 56 aa0.17□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms