RNA–Protein interactions for RNA: ENST00000510051.5

PACRGL-223, Transcript of parkin coregulated like, human

TSL 1 (best)

Gene PACRGL, Length 981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-223	ENST00000510051	PP632	Q6XCG6	107 aa		6.92	□□□□□ -1.3
PACRGL-223	ENST00000510051	KRTAP4-9	Q9BYQ8	210 aa		6.91	□□□□□ -1.3
PACRGL-223	ENST00000510051	C10orf95	Q9H7T3	257 aa		6.91	□□□□□ -1.3
PACRGL-223	ENST00000510051	LCE3A	Q5TA76	89 aa		6.88	□□□□□ -1.31
PACRGL-223	ENST00000510051	MT1M	Q8N339	61 aa		6.85	□□□□□ -1.31
PACRGL-223	ENST00000510051	MT1L	Q93083	61 aa		6.85	□□□□□ -1.31
PACRGL-223	ENST00000510051		K7ERS5	55 aa		6.81	□□□□□ -1.32
PACRGL-223	ENST00000510051		A6NED7	52 aa		6.79	□□□□□ -1.32
PACRGL-223	ENST00000510051		H3BS24	57 aa		6.79	□□□□□ -1.32
PACRGL-223	ENST00000510051	LCE1D	Q5T752	114 aa		6.71	□□□□□ -1.34
PACRGL-223	ENST00000510051	KRTAP4-3	Q9BYR4	195 aa		6.71	□□□□□ -1.34
PACRGL-223	ENST00000510051	LCE4A	Q5TA78	99 aa		6.69	□□□□□ -1.34
PACRGL-223	ENST00000510051	GPR98	Q8WXG9	6306 aa		6.68	□□□□□ -1.34
PACRGL-223	ENST00000510051	MT4	P47944	62 aa		6.66	□□□□□ -1.34
PACRGL-223	ENST00000510051	KRTAP12-3	P60328	96 aa		6.62	□□□□□ -1.35
PACRGL-223	ENST00000510051	KRTAP25-1	Q3LHN0	102 aa		6.6	□□□□□ -1.35
PACRGL-223	ENST00000510051	CDC42SE1	Q9NRR8	79 aa		6.59	□□□□□ -1.35
PACRGL-223	ENST00000510051	HMCN1	Q96RW7	5635 aa		6.58	□□□□□ -1.36
PACRGL-223	ENST00000510051	KRTAP4-7	Q9BYR0	210 aa		6.54	□□□□□ -1.36
PACRGL-223	ENST00000510051	KRTAP5-4	Q6L8H1	288 aa		6.52	□□□□□ -1.37
PACRGL-223	ENST00000510051	LOC100996750	A0A140TA64	210 aa		6.48	□□□□□ -1.37
PACRGL-223	ENST00000510051	KRTAP4-6	Q9BYQ5	205 aa		6.48	□□□□□ -1.37
PACRGL-223	ENST00000510051	KRTAP23-1	A1A580	65 aa		6.43	□□□□□ -1.38
PACRGL-223	ENST00000510051	ROMO1	P60602	79 aa		6.39	□□□□□ -1.39
PACRGL-223	ENST00000510051	AHNAK2	Q8IVF2	5795 aa		6.38	□□□□□ -1.39
PACRGL-223	ENST00000510051	SVIP	Q8NHG7	77 aa		6.31	□□□□□ -1.4
PACRGL-223	ENST00000510051	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.25	□□□□□ -1.41
PACRGL-223	ENST00000510051	KRTAP5-10	Q6L8G5	202 aa		6.23	□□□□□ -1.41
PACRGL-223	ENST00000510051	KRTAP19-4	Q3LI73	84 aa		6.2	□□□□□ -1.42
PACRGL-223	ENST00000510051	KRTAP20-2	Q3LI61	65 aa		6.19	□□□□□ -1.42
PACRGL-223	ENST00000510051	BRK1	Q8WUW1	75 aa		6.18	□□□□□ -1.42
PACRGL-223	ENST00000510051	KRTAP12-4	P60329	112 aa		6.16	□□□□□ -1.42
PACRGL-223	ENST00000510051	KRTAP15-1	Q3LI76	137 aa		6.16	□□□□□ -1.42
PACRGL-223	ENST00000510051	SPRR5	A0A1B0GTR4	108 aa		6.14	□□□□□ -1.43
PACRGL-223	ENST00000510051	KRTAP5-3	Q6L8H2	238 aa		6.1	□□□□□ -1.43
PACRGL-223	ENST00000510051	SYNE1	Q8NF91	8797 aa	Known RBP	6.09	□□□□□ -1.43
PACRGL-223	ENST00000510051	LCE3C	Q5T5A8	94 aa		6.08	□□□□□ -1.44
PACRGL-223	ENST00000510051	KRTAP5-7	Q6L8G8	165 aa		5.99	□□□□□ -1.45
PACRGL-223	ENST00000510051	PMAIP1	Q13794	54 aa		5.87	□□□□□ -1.47
PACRGL-223	ENST00000510051	MT1A	P04731	61 aa		5.83	□□□□□ -1.48
PACRGL-223	ENST00000510051	KRTAP6-1	Q3LI64	71 aa		5.81	□□□□□ -1.48
PACRGL-223	ENST00000510051	KRTAP9-6	A8MVA2	160 aa		5.72	□□□□□ -1.49
PACRGL-223	ENST00000510051	PRO0628	Q9UI54	55 aa		5.72	□□□□□ -1.49
PACRGL-223	ENST00000510051	KRTAP5-2	Q701N4	177 aa		5.7	□□□□□ -1.5
PACRGL-223	ENST00000510051	KRTAP4-12	Q9BQ66	201 aa		5.66	□□□□□ -1.5
PACRGL-223	ENST00000510051	KRTAP4-11	Q9BYQ6	195 aa		5.66	□□□□□ -1.5
PACRGL-223	ENST00000510051	KRTAP9-4	Q9BYQ2	154 aa		5.65	□□□□□ -1.5
PACRGL-223	ENST00000510051	KRTAP6-2	Q3LI66	62 aa		5.56	□□□□□ -1.52
PACRGL-223	ENST00000510051	PRAC1	Q96KF2	57 aa		5.49	□□□□□ -1.53
PACRGL-223	ENST00000510051	KRTAP9-9	Q9BYP9	154 aa		5.48	□□□□□ -1.53
PACRGL-223	ENST00000510051	KRTAP5-8	O75690	187 aa		5.47	□□□□□ -1.53
PACRGL-223	ENST00000510051	KTN1-AS1	Q86SY8	53 aa		5.38	□□□□□ -1.55
PACRGL-223	ENST00000510051	MT3	P25713	68 aa		5.35	□□□□□ -1.55
PACRGL-223	ENST00000510051	OBSCN	Q5VST9	7968 aa		5.34	□□□□□ -1.55
PACRGL-223	ENST00000510051	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.25	□□□□□ -1.57
PACRGL-223	ENST00000510051	AHNAK	Q09666	5890 aa	Known RBP	5.24	□□□□□ -1.57
PACRGL-223	ENST00000510051		A0A0A0MQY5	61 aa		5.2	□□□□□ -1.58
PACRGL-223	ENST00000510051	MUC5AC	P98088	5654 aa		5.19	□□□□□ -1.58
PACRGL-223	ENST00000510051	KRTAP5-1	Q6L8H4	278 aa		5.13	□□□□□ -1.59
PACRGL-223	ENST00000510051	KRTAP4-2	Q9BYR5	136 aa		5.01	□□□□□ -1.61
PACRGL-223	ENST00000510051	LCE1E	Q5T753	118 aa		4.89	□□□□□ -1.63
PACRGL-223	ENST00000510051	LUZP6	Q538Z0	58 aa		4.68	□□□□□ -1.66
PACRGL-223	ENST00000510051	LCE1B	Q5T7P3	118 aa		4.68	□□□□□ -1.66
PACRGL-223	ENST00000510051	LCE1C	Q5T751	118 aa		4.54	□□□□□ -1.68
PACRGL-223	ENST00000510051	LCE3D	Q9BYE3	92 aa		4.38	□□□□□ -1.71
PACRGL-223	ENST00000510051	LCE3E	Q5T5B0	92 aa		4.14	□□□□□ -1.75
PACRGL-223	ENST00000510051	KRTAP5-11	Q6L8G4	156 aa		4.11	□□□□□ -1.75
PACRGL-223	ENST00000510051	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.11	□□□□□ -1.75
PACRGL-223	ENST00000510051	LCE1F	Q5T754	118 aa		4.02	□□□□□ -1.77
PACRGL-223	ENST00000510051	NDUFAF8	A1L188	74 aa		4	□□□□□ -1.77
PACRGL-223	ENST00000510051	KRTAP21-2	Q3LI59	83 aa		3.81	□□□□□ -1.8
PACRGL-223	ENST00000510051	PHGR1	C9JFL3	82 aa		3.67	□□□□□ -1.82
PACRGL-223	ENST00000510051	KRTAP4-4	Q9BYR3	166 aa		3.55	□□□□□ -1.84
PACRGL-223	ENST00000510051	INE1	O15225	51 aa		3.36	□□□□□ -1.87
PACRGL-223	ENST00000510051	MUC19	Q7Z5P9	8384 aa		3.32	□□□□□ -1.88
PACRGL-223	ENST00000510051	PRM1	P04553	51 aa		3.25	□□□□□ -1.89
PACRGL-223	ENST00000510051	KRTAP21-1	Q3LI58	79 aa		2.77	□□□□□ -1.97
PACRGL-223	ENST00000510051	MUC16	Q8WXI7	14507 aa		2.39	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 62.3 ms