RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 ATP5EP56381 51 aaPredicted RBP7.46□□□□□ -1.22
LIN54-208ENST00000509748 KRTAP9-9Q9BYP9 154 aa7.44□□□□□ -1.22
LIN54-208ENST00000509748 KRTAP9-4Q9BYQ2 154 aa7.44□□□□□ -1.22
LIN54-208ENST00000509748 PRR15LQ9BU68 103 aa7.43□□□□□ -1.22
LIN54-208ENST00000509748 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
LIN54-208ENST00000509748 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
LIN54-208ENST00000509748 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.22
LIN54-208ENST00000509748 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
LIN54-208ENST00000509748 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
LIN54-208ENST00000509748 HMCN1Q96RW7 5635 aa7.32□□□□□ -1.24
LIN54-208ENST00000509748 TMEM258P61165 79 aa7.31□□□□□ -1.24
LIN54-208ENST00000509748 MT4P47944 62 aa7.28□□□□□ -1.24
LIN54-208ENST00000509748 KRTAP5-4Q6L8H1 288 aa7.27□□□□□ -1.25
LIN54-208ENST00000509748 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
LIN54-208ENST00000509748 UQCR11O14957 56 aa7.21□□□□□ -1.26
LIN54-208ENST00000509748 KRTAP4-7Q9BYR0 210 aa7.21□□□□□ -1.26
LIN54-208ENST00000509748 AHNAK2Q8IVF2 5795 aa7.12□□□□□ -1.27
LIN54-208ENST00000509748 MIR22HGQ0VDD5 57 aa7.05□□□□□ -1.28
LIN54-208ENST00000509748 KRTAP25-1Q3LHN0 102 aa7.03□□□□□ -1.28
LIN54-208ENST00000509748 KRTAP5-5Q701N2 237 aaPredicted RBP6.96□□□□□ -1.3
LIN54-208ENST00000509748 KRTAP5-10Q6L8G5 202 aa6.94□□□□□ -1.3
LIN54-208ENST00000509748 PSPHP1O15172 72 aa6.92□□□□□ -1.3
LIN54-208ENST00000509748 K7ERS5 55 aa6.86□□□□□ -1.31
LIN54-208ENST00000509748 V9GYY9 64 aa6.85□□□□□ -1.31
LIN54-208ENST00000509748 Q1T7F1 81 aa6.84□□□□□ -1.31
LIN54-208ENST00000509748 KRTAP20-2Q3LI61 65 aa6.84□□□□□ -1.31
LIN54-208ENST00000509748 SPRR5A0A1B0GTR4 108 aa6.79□□□□□ -1.32
LIN54-208ENST00000509748 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
LIN54-208ENST00000509748 SYNE1Q8NF91 8797 aaKnown RBP6.76□□□□□ -1.33
LIN54-208ENST00000509748 KRTAP5-3Q6L8H2 238 aa6.75□□□□□ -1.33
LIN54-208ENST00000509748 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
LIN54-208ENST00000509748 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
LIN54-208ENST00000509748 KRTAP4-2Q9BYR5 136 aa6.71□□□□□ -1.34
LIN54-208ENST00000509748 KRTAP4-11Q9BYQ6 195 aa6.7□□□□□ -1.34
LIN54-208ENST00000509748 A6NED7 52 aa6.67□□□□□ -1.34
LIN54-208ENST00000509748 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
LIN54-208ENST00000509748 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
LIN54-208ENST00000509748 PCP4P48539 62 aa6.55□□□□□ -1.36
LIN54-208ENST00000509748 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
LIN54-208ENST00000509748 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
LIN54-208ENST00000509748 ROMO1P60602 79 aa6.45□□□□□ -1.38
LIN54-208ENST00000509748 MT1AP04731 61 aa6.42□□□□□ -1.38
LIN54-208ENST00000509748 KRTAP6-1Q3LI64 71 aa6.41□□□□□ -1.38
LIN54-208ENST00000509748 KRTAP5-2Q701N4 177 aa6.36□□□□□ -1.39
LIN54-208ENST00000509748 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
LIN54-208ENST00000509748 SVIPQ8NHG7 77 aa6.16□□□□□ -1.42
LIN54-208ENST00000509748 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
LIN54-208ENST00000509748 KRTAP5-8O75690 187 aa6.08□□□□□ -1.44
LIN54-208ENST00000509748 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
LIN54-208ENST00000509748 AHNAKQ09666 5890 aaKnown RBP5.87□□□□□ -1.47
LIN54-208ENST00000509748 MT3P25713 68 aa5.86□□□□□ -1.47
LIN54-208ENST00000509748 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
LIN54-208ENST00000509748 MUC5ACP98088 5654 aa5.83□□□□□ -1.48
LIN54-208ENST00000509748 BRK1Q8WUW1 75 aa5.81□□□□□ -1.48
LIN54-208ENST00000509748 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
LIN54-208ENST00000509748 LCE1EQ5T753 118 aa5.42□□□□□ -1.54
LIN54-208ENST00000509748 PMAIP1Q13794 54 aa5.41□□□□□ -1.54
LIN54-208ENST00000509748 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
LIN54-208ENST00000509748 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
LIN54-208ENST00000509748 LCE1CQ5T751 118 aa5.03□□□□□ -1.6
LIN54-208ENST00000509748 PRO0628Q9UI54 55 aa5.03□□□□□ -1.6
LIN54-208ENST00000509748 KTN1-AS1Q86SY8 53 aa4.84□□□□□ -1.63
LIN54-208ENST00000509748 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
LIN54-208ENST00000509748 A0A0A0MQY5 61 aa4.63□□□□□ -1.67
LIN54-208ENST00000509748 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
LIN54-208ENST00000509748 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
LIN54-208ENST00000509748 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
LIN54-208ENST00000509748 LCE1FQ5T754 118 aa4.44□□□□□ -1.7
LIN54-208ENST00000509748 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
LIN54-208ENST00000509748 KRTAP21-2Q3LI59 83 aa4.24□□□□□ -1.73
LIN54-208ENST00000509748 PHGR1C9JFL3 82 aa4□□□□□ -1.77
LIN54-208ENST00000509748 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
LIN54-208ENST00000509748 NDUFAF8A1L188 74 aa3.86□□□□□ -1.79
LIN54-208ENST00000509748 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
LIN54-208ENST00000509748 PRM1P04553 51 aa3.3□□□□□ -1.88
LIN54-208ENST00000509748 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
LIN54-208ENST00000509748 INE1O15225 51 aa2.79□□□□□ -1.96
LIN54-208ENST00000509748 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms