RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 MT1LQ93083 61 aa5.65□□□□□ -1.5
RAB40C-202ENST00000509637 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
RAB40C-202ENST00000509637 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
RAB40C-202ENST00000509637 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
RAB40C-202ENST00000509637 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
RAB40C-202ENST00000509637 V9GYY9 64 aa5.55□□□□□ -1.52
RAB40C-202ENST00000509637 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
RAB40C-202ENST00000509637 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
RAB40C-202ENST00000509637 UQCR11O14957 56 aa5.48□□□□□ -1.53
RAB40C-202ENST00000509637 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
RAB40C-202ENST00000509637 Q1T7F1 81 aa5.48□□□□□ -1.53
RAB40C-202ENST00000509637 KRTAP5-7Q6L8G8 165 aa5.47□□□□□ -1.53
RAB40C-202ENST00000509637 KRTAP4-7Q9BYR0 210 aa5.47□□□□□ -1.53
RAB40C-202ENST00000509637 A8MU10 97 aa5.46□□□□□ -1.54
RAB40C-202ENST00000509637 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
RAB40C-202ENST00000509637 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
RAB40C-202ENST00000509637 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
RAB40C-202ENST00000509637 PSPHP1O15172 72 aa5.42□□□□□ -1.54
RAB40C-202ENST00000509637 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
RAB40C-202ENST00000509637 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
RAB40C-202ENST00000509637 KRTAP5-5Q701N2 237 aaPredicted RBP5.3□□□□□ -1.56
RAB40C-202ENST00000509637 A6NED7 52 aa5.28□□□□□ -1.56
RAB40C-202ENST00000509637 K7ERS5 55 aa5.27□□□□□ -1.57
RAB40C-202ENST00000509637 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
RAB40C-202ENST00000509637 TNP1P09430 55 aa5.21□□□□□ -1.58
RAB40C-202ENST00000509637 LOC100996750A0A140TA64 210 aa5.18□□□□□ -1.58
RAB40C-202ENST00000509637 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
RAB40C-202ENST00000509637 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
RAB40C-202ENST00000509637 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
RAB40C-202ENST00000509637 KRTAP12-4P60329 112 aa5.09□□□□□ -1.59
RAB40C-202ENST00000509637 KRTAP25-1Q3LHN0 102 aa5.02□□□□□ -1.61
RAB40C-202ENST00000509637 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
RAB40C-202ENST00000509637 ROMO1P60602 79 aa4.92□□□□□ -1.62
RAB40C-202ENST00000509637 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
RAB40C-202ENST00000509637 BRK1Q8WUW1 75 aa4.87□□□□□ -1.63
RAB40C-202ENST00000509637 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
RAB40C-202ENST00000509637 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
RAB40C-202ENST00000509637 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
RAB40C-202ENST00000509637 MT1AP04731 61 aa4.78□□□□□ -1.64
RAB40C-202ENST00000509637 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
RAB40C-202ENST00000509637 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
RAB40C-202ENST00000509637 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
RAB40C-202ENST00000509637 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
RAB40C-202ENST00000509637 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
RAB40C-202ENST00000509637 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
RAB40C-202ENST00000509637 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
RAB40C-202ENST00000509637 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
RAB40C-202ENST00000509637 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
RAB40C-202ENST00000509637 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
RAB40C-202ENST00000509637 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
RAB40C-202ENST00000509637 PMAIP1Q13794 54 aa4.6□□□□□ -1.67
RAB40C-202ENST00000509637 KRTAP9-9Q9BYP9 154 aa4.53□□□□□ -1.68
RAB40C-202ENST00000509637 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
RAB40C-202ENST00000509637 MT3P25713 68 aa4.33□□□□□ -1.72
RAB40C-202ENST00000509637 H3BS24 57 aa4.32□□□□□ -1.72
RAB40C-202ENST00000509637 KTN1-AS1Q86SY8 53 aa4.31□□□□□ -1.72
RAB40C-202ENST00000509637 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
RAB40C-202ENST00000509637 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
RAB40C-202ENST00000509637 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
RAB40C-202ENST00000509637 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
RAB40C-202ENST00000509637 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
RAB40C-202ENST00000509637 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
RAB40C-202ENST00000509637 KRTAP4-12Q9BQ66 201 aa3.75□□□□□ -1.81
RAB40C-202ENST00000509637 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
RAB40C-202ENST00000509637 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
RAB40C-202ENST00000509637 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
RAB40C-202ENST00000509637 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
RAB40C-202ENST00000509637 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
RAB40C-202ENST00000509637 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
RAB40C-202ENST00000509637 PHGR1C9JFL3 82 aa3.27□□□□□ -1.89
RAB40C-202ENST00000509637 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
RAB40C-202ENST00000509637 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
RAB40C-202ENST00000509637 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
RAB40C-202ENST00000509637 INE1O15225 51 aa2.99□□□□□ -1.93
RAB40C-202ENST00000509637 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
RAB40C-202ENST00000509637 PRM1P04553 51 aa2.52□□□□□ -2.01
RAB40C-202ENST00000509637 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
RAB40C-202ENST00000509637 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 78.1 ms