RNA–Protein interactions for RNA: ENST00000508504.1

TRIM60-203, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM60, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-203ENST00000508504 NEBP20929 6669 aa6.41□□□□□ -1.38
TRIM60-203ENST00000508504 NDUFAF8A1L188 74 aa6.4□□□□□ -1.38
TRIM60-203ENST00000508504 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
TRIM60-203ENST00000508504 SPRR2EP22531 72 aa6.36□□□□□ -1.39
TRIM60-203ENST00000508504 SPRR2BP35325 72 aa6.36□□□□□ -1.39
TRIM60-203ENST00000508504 SPRR2AP35326 72 aa6.36□□□□□ -1.39
TRIM60-203ENST00000508504 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
TRIM60-203ENST00000508504 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
TRIM60-203ENST00000508504 KRTAP19-3Q7Z4W3 81 aa6.25□□□□□ -1.41
TRIM60-203ENST00000508504 MT1LQ93083 61 aa6.25□□□□□ -1.41
TRIM60-203ENST00000508504 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
TRIM60-203ENST00000508504 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
TRIM60-203ENST00000508504 MT1GP13640 62 aa6.14□□□□□ -1.43
TRIM60-203ENST00000508504 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
TRIM60-203ENST00000508504 SPRR2DP22532 72 aa6.13□□□□□ -1.43
TRIM60-203ENST00000508504 MT1MQ8N339 61 aa6.08□□□□□ -1.44
TRIM60-203ENST00000508504 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
TRIM60-203ENST00000508504 KRTAP4-3Q9BYR4 195 aa6.02□□□□□ -1.45
TRIM60-203ENST00000508504 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
TRIM60-203ENST00000508504 KRTAP2-3P0C7H8 128 aa5.92□□□□□ -1.46
TRIM60-203ENST00000508504 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
TRIM60-203ENST00000508504 KRTAP2-4Q9BYR9 128 aa5.92□□□□□ -1.46
TRIM60-203ENST00000508504 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
TRIM60-203ENST00000508504 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
TRIM60-203ENST00000508504 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
TRIM60-203ENST00000508504 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
TRIM60-203ENST00000508504 LOC100996750A0A140TA64 210 aa5.72□□□□□ -1.49
TRIM60-203ENST00000508504 KRTAP9-6A8MVA2 160 aa5.66□□□□□ -1.5
TRIM60-203ENST00000508504 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.51
TRIM60-203ENST00000508504 INE1O15225 51 aa5.63□□□□□ -1.51
TRIM60-203ENST00000508504 KRTAP5-5Q701N2 237 aaPredicted RBP5.54□□□□□ -1.52
TRIM60-203ENST00000508504 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
TRIM60-203ENST00000508504 KRTAP5-4Q6L8H1 288 aa5.47□□□□□ -1.53
TRIM60-203ENST00000508504 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
TRIM60-203ENST00000508504 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
TRIM60-203ENST00000508504 MT4P47944 62 aa5.37□□□□□ -1.55
TRIM60-203ENST00000508504 HMCN1Q96RW7 5635 aa5.35□□□□□ -1.55
TRIM60-203ENST00000508504 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
TRIM60-203ENST00000508504 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
TRIM60-203ENST00000508504 KRTAP6-1Q3LI64 71 aa5.29□□□□□ -1.56
TRIM60-203ENST00000508504 MT1AP04731 61 aa5.28□□□□□ -1.56
TRIM60-203ENST00000508504 KRTAP12-4P60329 112 aa5.18□□□□□ -1.58
TRIM60-203ENST00000508504 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
TRIM60-203ENST00000508504 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
TRIM60-203ENST00000508504 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
TRIM60-203ENST00000508504 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
TRIM60-203ENST00000508504 AHNAK2Q8IVF2 5795 aa4.89□□□□□ -1.63
TRIM60-203ENST00000508504 KRTAP5-2Q701N4 177 aa4.89□□□□□ -1.63
TRIM60-203ENST00000508504 MT3P25713 68 aa4.79□□□□□ -1.64
TRIM60-203ENST00000508504 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
TRIM60-203ENST00000508504 GPR98Q8WXG9 6306 aa4.76□□□□□ -1.65
TRIM60-203ENST00000508504 KRTAP5-10Q6L8G5 202 aa4.67□□□□□ -1.66
TRIM60-203ENST00000508504 KRTAP4-11Q9BYQ6 195 aa4.55□□□□□ -1.68
TRIM60-203ENST00000508504 KRTAP9-9Q9BYP9 154 aa4.46□□□□□ -1.7
TRIM60-203ENST00000508504 KRTAP5-8O75690 187 aa4.39□□□□□ -1.71
TRIM60-203ENST00000508504 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
TRIM60-203ENST00000508504 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
TRIM60-203ENST00000508504 KRTAP4-2Q9BYR5 136 aa4.32□□□□□ -1.72
TRIM60-203ENST00000508504 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
TRIM60-203ENST00000508504 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
TRIM60-203ENST00000508504 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
TRIM60-203ENST00000508504 MUC5ACP98088 5654 aa4.21□□□□□ -1.73
TRIM60-203ENST00000508504 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
TRIM60-203ENST00000508504 LCE1BQ5T7P3 118 aa4.03□□□□□ -1.76
TRIM60-203ENST00000508504 MUC5BQ9HC84 5762 aaPredicted RBP3.99□□□□□ -1.77
TRIM60-203ENST00000508504 LCE1CQ5T751 118 aa3.97□□□□□ -1.77
TRIM60-203ENST00000508504 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
TRIM60-203ENST00000508504 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
TRIM60-203ENST00000508504 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
TRIM60-203ENST00000508504 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
TRIM60-203ENST00000508504 PRM1P04553 51 aa3.49□□□□□ -1.85
TRIM60-203ENST00000508504 KRTAP21-2Q3LI59 83 aa3.47□□□□□ -1.85
TRIM60-203ENST00000508504 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
TRIM60-203ENST00000508504 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
TRIM60-203ENST00000508504 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
TRIM60-203ENST00000508504 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
TRIM60-203ENST00000508504 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 132.8 ms