RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 A8MU10 97 aa3.64□□□□□ -1.83
USP46-207ENST00000508499 KRTAP12-1P59990 96 aa3.63□□□□□ -1.83
USP46-207ENST00000508499 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
USP46-207ENST00000508499 MT1XP80297 61 aa3.61□□□□□ -1.83
USP46-207ENST00000508499 A0A0D9SG42 100 aa3.61□□□□□ -1.83
USP46-207ENST00000508499 KRTAP12-2P59991 146 aa3.59□□□□□ -1.84
USP46-207ENST00000508499 NDUFAF8A1L188 74 aa3.57□□□□□ -1.84
USP46-207ENST00000508499 SPINT4Q6UDR6 99 aa3.55□□□□□ -1.84
USP46-207ENST00000508499 FCGBPQ9Y6R7 5405 aaPredicted RBP3.55□□□□□ -1.84
USP46-207ENST00000508499 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
USP46-207ENST00000508499 MT3P25713 68 aa3.47□□□□□ -1.85
USP46-207ENST00000508499 KRTAP10-12P60413 245 aa3.47□□□□□ -1.85
USP46-207ENST00000508499 C10orf95Q9H7T3 257 aa3.43□□□□□ -1.86
USP46-207ENST00000508499 TNP1P09430 55 aa3.38□□□□□ -1.87
USP46-207ENST00000508499 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
USP46-207ENST00000508499 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
USP46-207ENST00000508499 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
USP46-207ENST00000508499 KMT2DO14686 5537 aa3.26□□□□□ -1.89
USP46-207ENST00000508499 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
USP46-207ENST00000508499 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
USP46-207ENST00000508499 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
USP46-207ENST00000508499 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
USP46-207ENST00000508499 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
USP46-207ENST00000508499 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
USP46-207ENST00000508499 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
USP46-207ENST00000508499 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
USP46-207ENST00000508499 MT1EP04732 61 aa3.19□□□□□ -1.9
USP46-207ENST00000508499 KRTAP19-5Q3LI72 72 aa3.19□□□□□ -1.9
USP46-207ENST00000508499 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
USP46-207ENST00000508499 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
USP46-207ENST00000508499 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
USP46-207ENST00000508499 INE1O15225 51 aa3.14□□□□□ -1.91
USP46-207ENST00000508499 SPRR2EP22531 72 aa3.11□□□□□ -1.91
USP46-207ENST00000508499 SPRR2BP35325 72 aa3.11□□□□□ -1.91
USP46-207ENST00000508499 SPRR2AP35326 72 aa3.11□□□□□ -1.91
USP46-207ENST00000508499 KRTAP19-3Q7Z4W3 81 aa3.11□□□□□ -1.91
USP46-207ENST00000508499 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.91
USP46-207ENST00000508499 MT1GP13640 62 aa3.09□□□□□ -1.92
USP46-207ENST00000508499 MT1LQ93083 61 aa3.09□□□□□ -1.92
USP46-207ENST00000508499 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
USP46-207ENST00000508499 SPRR2DP22532 72 aa3.01□□□□□ -1.93
USP46-207ENST00000508499 MT1MQ8N339 61 aa3.01□□□□□ -1.93
USP46-207ENST00000508499 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
USP46-207ENST00000508499 NEBP20929 6669 aa2.99□□□□□ -1.93
USP46-207ENST00000508499 KRTAP2-3P0C7H8 128 aa2.97□□□□□ -1.93
USP46-207ENST00000508499 KRTAP2-4Q9BYR9 128 aa2.97□□□□□ -1.93
USP46-207ENST00000508499 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
USP46-207ENST00000508499 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
USP46-207ENST00000508499 DSTQ03001 7570 aaKnown RBP2.83□□□□□ -1.96
USP46-207ENST00000508499 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
USP46-207ENST00000508499 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
USP46-207ENST00000508499 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
USP46-207ENST00000508499 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
USP46-207ENST00000508499 MT1AP04731 61 aa2.65□□□□□ -1.99
USP46-207ENST00000508499 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
USP46-207ENST00000508499 MT4P47944 62 aa2.58□□□□□ -2
USP46-207ENST00000508499 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
USP46-207ENST00000508499 KRTAP20-2Q3LI61 65 aa2.55□□□□□ -2
USP46-207ENST00000508499 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
USP46-207ENST00000508499 SYNE1Q8NF91 8797 aaKnown RBP2.46□□□□□ -2.02
USP46-207ENST00000508499 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
USP46-207ENST00000508499 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
USP46-207ENST00000508499 KRTAP6-2Q3LI66 62 aa2.41□□□□□ -2.02
USP46-207ENST00000508499 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.04
USP46-207ENST00000508499 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
USP46-207ENST00000508499 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
USP46-207ENST00000508499 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
USP46-207ENST00000508499 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
USP46-207ENST00000508499 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
USP46-207ENST00000508499 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
USP46-207ENST00000508499 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
USP46-207ENST00000508499 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
USP46-207ENST00000508499 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
USP46-207ENST00000508499 PRM1P04553 51 aa1.72□□□□□ -2.13
USP46-207ENST00000508499 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
USP46-207ENST00000508499 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
USP46-207ENST00000508499 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 42.1 ms