RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 MT1MQ8N339 61 aa2.06□□□□□ -2.08
KDM3B-205ENST00000508386 OBSCNQ5VST9 7968 aa2.05□□□□□ -2.08
KDM3B-205ENST00000508386 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
KDM3B-205ENST00000508386 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
KDM3B-205ENST00000508386 HIST1H4AP62805 103 aaKnown RBP2.04□□□□□ -2.08
KDM3B-205ENST00000508386 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
KDM3B-205ENST00000508386 TP53AIP1Q9HCN2 124 aa2.03□□□□□ -2.08
KDM3B-205ENST00000508386 K7ERS5 55 aa2.02□□□□□ -2.09
KDM3B-205ENST00000508386 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
KDM3B-205ENST00000508386 SYNE1Q8NF91 8797 aaKnown RBP2□□□□□ -2.09
KDM3B-205ENST00000508386 LOC101927531A0A1B0GV80 90 aa2□□□□□ -2.09
KDM3B-205ENST00000508386 MT1LQ93083 61 aa2□□□□□ -2.09
KDM3B-205ENST00000508386 TRAV22A0A0B4J277 110 aa1.99□□□□□ -2.09
KDM3B-205ENST00000508386 UQCRQO14949 82 aa1.99□□□□□ -2.09
KDM3B-205ENST00000508386 ATOX1O00244 68 aa1.98□□□□□ -2.09
KDM3B-205ENST00000508386 MT-ATP8P03928 68 aa1.98□□□□□ -2.09
KDM3B-205ENST00000508386 SCGB1A1P11684 91 aa1.98□□□□□ -2.09
KDM3B-205ENST00000508386 PP632Q6XCG6 107 aa1.98□□□□□ -2.09
KDM3B-205ENST00000508386 A6NED7 52 aa1.97□□□□□ -2.09
KDM3B-205ENST00000508386 PMAIP1Q13794 54 aa1.97□□□□□ -2.09
KDM3B-205ENST00000508386 C20orf197Q8N268 126 aa1.97□□□□□ -2.09
KDM3B-205ENST00000508386 SMIM20Q8N5G0 67 aa1.97□□□□□ -2.09
KDM3B-205ENST00000508386 H0Y9P7 68 aa1.96□□□□□ -2.1
KDM3B-205ENST00000508386 H3BPC8 53 aa1.96□□□□□ -2.1
KDM3B-205ENST00000508386 LCE3AQ5TA76 89 aa1.96□□□□□ -2.1
KDM3B-205ENST00000508386 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
KDM3B-205ENST00000508386 TRAV7A0A075B6U4 112 aa1.94□□□□□ -2.1
KDM3B-205ENST00000508386 LINC00208Q96KT6 92 aa1.94□□□□□ -2.1
KDM3B-205ENST00000508386 A0A0D9SG42 100 aa1.92□□□□□ -2.1
KDM3B-205ENST00000508386 KRTAP13-4Q3LI77 160 aa1.91□□□□□ -2.1
KDM3B-205ENST00000508386 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
KDM3B-205ENST00000508386 SERP2Q8N6R1 65 aa1.91□□□□□ -2.1
KDM3B-205ENST00000508386 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
KDM3B-205ENST00000508386 COX7CP15954 63 aa1.88□□□□□ -2.11
KDM3B-205ENST00000508386 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
KDM3B-205ENST00000508386 KRTAP25-1Q3LHN0 102 aa1.88□□□□□ -2.11
KDM3B-205ENST00000508386 A0A1B0GU33 70 aa1.87□□□□□ -2.11
KDM3B-205ENST00000508386 DMAC1Q96GE9 116 aa1.87□□□□□ -2.11
KDM3B-205ENST00000508386 SNURFQ9Y675 71 aa1.87□□□□□ -2.11
KDM3B-205ENST00000508386 ACYP2P14621 99 aa1.85□□□□□ -2.11
KDM3B-205ENST00000508386 SPTSSBQ8NFR3 76 aa1.84□□□□□ -2.11
KDM3B-205ENST00000508386 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
KDM3B-205ENST00000508386 KRTAP5-2Q701N4 177 aa1.83□□□□□ -2.12
KDM3B-205ENST00000508386 CHKB-CPT1BH3BT56 60 aa1.82□□□□□ -2.12
KDM3B-205ENST00000508386 H7BZZ5 65 aa1.82□□□□□ -2.12
KDM3B-205ENST00000508386 CCDC179H3BU77 68 aa1.81□□□□□ -2.12
KDM3B-205ENST00000508386 ATP5EP56381 51 aaPredicted RBP1.81□□□□□ -2.12
KDM3B-205ENST00000508386 COA5Q86WW8 74 aa1.79□□□□□ -2.12
KDM3B-205ENST00000508386 TMEM258P61165 79 aa1.78□□□□□ -2.12
KDM3B-205ENST00000508386 SERP1Q9Y6X1 66 aa1.74□□□□□ -2.13
KDM3B-205ENST00000508386 KRTAP12-1P59990 96 aa1.73□□□□□ -2.13
KDM3B-205ENST00000508386 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
KDM3B-205ENST00000508386 KTN1-AS1Q86SY8 53 aa1.73□□□□□ -2.13
KDM3B-205ENST00000508386 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
KDM3B-205ENST00000508386 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
KDM3B-205ENST00000508386 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
KDM3B-205ENST00000508386 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
KDM3B-205ENST00000508386 A0A1B0GU69 56 aa1.71□□□□□ -2.14
KDM3B-205ENST00000508386 PRR15LQ9BU68 103 aa1.71□□□□□ -2.14
KDM3B-205ENST00000508386 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
KDM3B-205ENST00000508386 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
KDM3B-205ENST00000508386 LINC01558Q9Y6Z2 57 aa1.69□□□□□ -2.14
KDM3B-205ENST00000508386 MT1AP04731 61 aa1.68□□□□□ -2.14
KDM3B-205ENST00000508386 TNP1P09430 55 aa1.65□□□□□ -2.15
KDM3B-205ENST00000508386 RPS28P62857 69 aaKnown RBP1.65□□□□□ -2.15
KDM3B-205ENST00000508386 Q1T7F1 81 aa1.65□□□□□ -2.15
KDM3B-205ENST00000508386 UQCR11O14957 56 aa1.64□□□□□ -2.15
KDM3B-205ENST00000508386 MIR22HGQ0VDD5 57 aa1.6□□□□□ -2.15
KDM3B-205ENST00000508386 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
KDM3B-205ENST00000508386 ROMO1P60602 79 aa1.53□□□□□ -2.16
KDM3B-205ENST00000508386 BRK1Q8WUW1 75 aa1.51□□□□□ -2.17
KDM3B-205ENST00000508386 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
KDM3B-205ENST00000508386 INE1O15225 51 aa1.34□□□□□ -2.19
KDM3B-205ENST00000508386 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
KDM3B-205ENST00000508386 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
KDM3B-205ENST00000508386 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
KDM3B-205ENST00000508386 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
KDM3B-205ENST00000508386 PRM1P04553 51 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 131.3 ms