RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 SERP1Q9Y6X1 66 aa4.75□□□□□ -1.65
HMGCS1-205ENST00000508319 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
HMGCS1-205ENST00000508319 SPINT4Q6UDR6 99 aa4.73□□□□□ -1.65
HMGCS1-205ENST00000508319 CYSTM1Q9H1C7 97 aa4.73□□□□□ -1.65
HMGCS1-205ENST00000508319 PRO0628Q9UI54 55 aa4.73□□□□□ -1.65
HMGCS1-205ENST00000508319 A0A1B0GU33 70 aa4.72□□□□□ -1.65
HMGCS1-205ENST00000508319 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
HMGCS1-205ENST00000508319 MT1GP13640 62 aa4.7□□□□□ -1.66
HMGCS1-205ENST00000508319 H7BZZ5 65 aa4.65□□□□□ -1.67
HMGCS1-205ENST00000508319 COX7CP15954 63 aa4.65□□□□□ -1.67
HMGCS1-205ENST00000508319 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
HMGCS1-205ENST00000508319 MT1MQ8N339 61 aa4.65□□□□□ -1.67
HMGCS1-205ENST00000508319 MT1LQ93083 61 aa4.63□□□□□ -1.67
HMGCS1-205ENST00000508319 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
HMGCS1-205ENST00000508319 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
HMGCS1-205ENST00000508319 A8MU10 97 aa4.58□□□□□ -1.68
HMGCS1-205ENST00000508319 MT4P47944 62 aa4.57□□□□□ -1.68
HMGCS1-205ENST00000508319 A0A1B0GU69 56 aa4.56□□□□□ -1.68
HMGCS1-205ENST00000508319 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
HMGCS1-205ENST00000508319 C10orf95Q9H7T3 257 aa4.56□□□□□ -1.68
HMGCS1-205ENST00000508319 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
HMGCS1-205ENST00000508319 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
HMGCS1-205ENST00000508319 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
HMGCS1-205ENST00000508319 TNP1P09430 55 aa4.51□□□□□ -1.69
HMGCS1-205ENST00000508319 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
HMGCS1-205ENST00000508319 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
HMGCS1-205ENST00000508319 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
HMGCS1-205ENST00000508319 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
HMGCS1-205ENST00000508319 MT3P25713 68 aa4.38□□□□□ -1.71
HMGCS1-205ENST00000508319 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
HMGCS1-205ENST00000508319 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
HMGCS1-205ENST00000508319 CCDC179H3BU77 68 aa4.34□□□□□ -1.71
HMGCS1-205ENST00000508319 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
HMGCS1-205ENST00000508319 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
HMGCS1-205ENST00000508319 K7ERS5 55 aa4.29□□□□□ -1.72
HMGCS1-205ENST00000508319 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
HMGCS1-205ENST00000508319 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
HMGCS1-205ENST00000508319 UQCR11O14957 56 aa4.23□□□□□ -1.73
HMGCS1-205ENST00000508319 KRTAP5-7Q6L8G8 165 aa4.23□□□□□ -1.73
HMGCS1-205ENST00000508319 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
HMGCS1-205ENST00000508319 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
HMGCS1-205ENST00000508319 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
HMGCS1-205ENST00000508319 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
HMGCS1-205ENST00000508319 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
HMGCS1-205ENST00000508319 TMEM258P61165 79 aa4.16□□□□□ -1.74
HMGCS1-205ENST00000508319 A6NED7 52 aa4.14□□□□□ -1.75
HMGCS1-205ENST00000508319 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
HMGCS1-205ENST00000508319 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
HMGCS1-205ENST00000508319 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
HMGCS1-205ENST00000508319 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
HMGCS1-205ENST00000508319 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
HMGCS1-205ENST00000508319 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
HMGCS1-205ENST00000508319 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
HMGCS1-205ENST00000508319 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
HMGCS1-205ENST00000508319 MT1AP04731 61 aa3.93□□□□□ -1.78
HMGCS1-205ENST00000508319 Q1T7F1 81 aa3.93□□□□□ -1.78
HMGCS1-205ENST00000508319 KRTAP6-1Q3LI64 71 aa3.92□□□□□ -1.78
HMGCS1-205ENST00000508319 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
HMGCS1-205ENST00000508319 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
HMGCS1-205ENST00000508319 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
HMGCS1-205ENST00000508319 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
HMGCS1-205ENST00000508319 ROMO1P60602 79 aa3.77□□□□□ -1.81
HMGCS1-205ENST00000508319 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
HMGCS1-205ENST00000508319 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
HMGCS1-205ENST00000508319 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
HMGCS1-205ENST00000508319 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
HMGCS1-205ENST00000508319 BRK1Q8WUW1 75 aa3.62□□□□□ -1.83
HMGCS1-205ENST00000508319 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
HMGCS1-205ENST00000508319 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
HMGCS1-205ENST00000508319 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
HMGCS1-205ENST00000508319 INE1O15225 51 aa3.02□□□□□ -1.93
HMGCS1-205ENST00000508319 LCE3DQ9BYE3 92 aa2.95□□□□□ -1.94
HMGCS1-205ENST00000508319 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
HMGCS1-205ENST00000508319 PHGR1C9JFL3 82 aa2.55□□□□□ -2
HMGCS1-205ENST00000508319 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
HMGCS1-205ENST00000508319 PRM1P04553 51 aa1.94□□□□□ -2.1
HMGCS1-205ENST00000508319 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
HMGCS1-205ENST00000508319 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms