RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 LRP2P98164 4655 aa2.78□□□□□ -1.96
PDGFRA-206ENST00000508170 LPAP08519 4548 aa2.76□□□□□ -1.97
PDGFRA-206ENST00000508170 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
PDGFRA-206ENST00000508170 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
PDGFRA-206ENST00000508170 GPR98Q8WXG9 6306 aa2.67□□□□□ -1.98
PDGFRA-206ENST00000508170 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
PDGFRA-206ENST00000508170 SSPOA2VEC9 5147 aa2.6□□□□□ -1.99
PDGFRA-206ENST00000508170 NEBP20929 6669 aa2.6□□□□□ -1.99
PDGFRA-206ENST00000508170 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
PDGFRA-206ENST00000508170 KRTAP19-2Q3LHN2 52 aa2.58□□□□□ -2
PDGFRA-206ENST00000508170 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
PDGFRA-206ENST00000508170 KRTAP12-3P60328 96 aa2.57□□□□□ -2
PDGFRA-206ENST00000508170 TNP1P09430 55 aa2.54□□□□□ -2
PDGFRA-206ENST00000508170 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
PDGFRA-206ENST00000508170 SYNE2Q8WXH0 6885 aaKnown RBP2.5□□□□□ -2.01
PDGFRA-206ENST00000508170 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
PDGFRA-206ENST00000508170 MACF1Q9UPN3 7388 aaKnown RBP2.42□□□□□ -2.02
PDGFRA-206ENST00000508170 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
PDGFRA-206ENST00000508170 MT1HP80294 61 aa2.39□□□□□ -2.03
PDGFRA-206ENST00000508170 SPRR2GQ9BYE4 73 aa2.39□□□□□ -2.03
PDGFRA-206ENST00000508170 LCE3AQ5TA76 89 aa2.37□□□□□ -2.03
PDGFRA-206ENST00000508170 M0R2T5 61 aa2.35□□□□□ -2.03
PDGFRA-206ENST00000508170 MT2AP02795 61 aa2.31□□□□□ -2.04
PDGFRA-206ENST00000508170 MT1FP04733 61 aa2.3□□□□□ -2.04
PDGFRA-206ENST00000508170 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
PDGFRA-206ENST00000508170 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
PDGFRA-206ENST00000508170 USH2AO75445 5202 aa2.29□□□□□ -2.04
PDGFRA-206ENST00000508170 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
PDGFRA-206ENST00000508170 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
PDGFRA-206ENST00000508170 KRTAP2-3P0C7H8 128 aa2.26□□□□□ -2.05
PDGFRA-206ENST00000508170 KRTAP2-4Q9BYR9 128 aa2.26□□□□□ -2.05
PDGFRA-206ENST00000508170 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
PDGFRA-206ENST00000508170 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
PDGFRA-206ENST00000508170 MT1BP07438 61 aa2.24□□□□□ -2.05
PDGFRA-206ENST00000508170 MT1XP80297 61 aa2.22□□□□□ -2.05
PDGFRA-206ENST00000508170 KMT2DO14686 5537 aa2.21□□□□□ -2.06
PDGFRA-206ENST00000508170 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
PDGFRA-206ENST00000508170 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
PDGFRA-206ENST00000508170 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
PDGFRA-206ENST00000508170 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
PDGFRA-206ENST00000508170 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
PDGFRA-206ENST00000508170 KRTAP4-3Q9BYR4 195 aa2.09□□□□□ -2.08
PDGFRA-206ENST00000508170 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
PDGFRA-206ENST00000508170 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
PDGFRA-206ENST00000508170 KRTAP19-6Q3LI70 58 aa2.05□□□□□ -2.08
PDGFRA-206ENST00000508170 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
PDGFRA-206ENST00000508170 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
PDGFRA-206ENST00000508170 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
PDGFRA-206ENST00000508170 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
PDGFRA-206ENST00000508170 OBSCNQ5VST9 7968 aa2.02□□□□□ -2.09
PDGFRA-206ENST00000508170 PRM1P04553 51 aa2.01□□□□□ -2.09
PDGFRA-206ENST00000508170 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
PDGFRA-206ENST00000508170 KRTAP19-7Q3SYF9 63 aa1.99□□□□□ -2.09
PDGFRA-206ENST00000508170 DSTQ03001 7570 aaKnown RBP1.98□□□□□ -2.09
PDGFRA-206ENST00000508170 MDN1Q9NU22 5596 aa1.98□□□□□ -2.09
PDGFRA-206ENST00000508170 MT1LQ93083 61 aa1.93□□□□□ -2.1
PDGFRA-206ENST00000508170 MT1EP04732 61 aa1.93□□□□□ -2.1
PDGFRA-206ENST00000508170 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.1
PDGFRA-206ENST00000508170 SPRR2EP22531 72 aa1.89□□□□□ -2.11
PDGFRA-206ENST00000508170 SPRR2BP35325 72 aa1.89□□□□□ -2.11
PDGFRA-206ENST00000508170 SPRR2AP35326 72 aa1.89□□□□□ -2.11
PDGFRA-206ENST00000508170 SPRR2DP22532 72 aa1.83□□□□□ -2.12
PDGFRA-206ENST00000508170 SPRR2FQ96RM1 72 aa1.82□□□□□ -2.12
PDGFRA-206ENST00000508170 MT1GP13640 62 aa1.81□□□□□ -2.12
PDGFRA-206ENST00000508170 MT1MQ8N339 61 aa1.8□□□□□ -2.12
PDGFRA-206ENST00000508170 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
PDGFRA-206ENST00000508170 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
PDGFRA-206ENST00000508170 MT1AP04731 61 aa1.69□□□□□ -2.14
PDGFRA-206ENST00000508170 MT4P47944 62 aa1.66□□□□□ -2.14
PDGFRA-206ENST00000508170 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.15
PDGFRA-206ENST00000508170 KRTAP6-1Q3LI64 71 aa1.63□□□□□ -2.15
PDGFRA-206ENST00000508170 KRTAP6-2Q3LI66 62 aa1.58□□□□□ -2.16
PDGFRA-206ENST00000508170 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
PDGFRA-206ENST00000508170 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
PDGFRA-206ENST00000508170 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
PDGFRA-206ENST00000508170 KRTAP21-2Q3LI59 83 aa1.06□□□□□ -2.24
PDGFRA-206ENST00000508170 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 40 ms