RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	LCE1D	Q5T752	114 aa		4.77	□□□□□ -1.65
CDHR2-204	ENST00000508085	UQCR11	O14957	56 aa		4.76	□□□□□ -1.65
CDHR2-204	ENST00000508085	LCE4A	Q5TA78	99 aa		4.74	□□□□□ -1.65
CDHR2-204	ENST00000508085	HMCN1	Q96RW7	5635 aa		4.71	□□□□□ -1.66
CDHR2-204	ENST00000508085	KRTAP12-3	P60328	96 aa		4.71	□□□□□ -1.66
CDHR2-204	ENST00000508085	MT4	P47944	62 aa		4.7	□□□□□ -1.66
CDHR2-204	ENST00000508085	KRTAP4-7	Q9BYR0	210 aa		4.69	□□□□□ -1.66
CDHR2-204	ENST00000508085	KRTAP5-4	Q6L8H1	288 aa		4.68	□□□□□ -1.66
CDHR2-204	ENST00000508085	MIR22HG	Q0VDD5	57 aa		4.66	□□□□□ -1.66
CDHR2-204	ENST00000508085	GPR98	Q8WXG9	6306 aa		4.63	□□□□□ -1.67
CDHR2-204	ENST00000508085	SVIP	Q8NHG7	77 aa		4.62	□□□□□ -1.67
CDHR2-204	ENST00000508085	KRTAP25-1	Q3LHN0	102 aa		4.61	□□□□□ -1.67
CDHR2-204	ENST00000508085	PCP4	P48539	62 aa		4.59	□□□□□ -1.67
CDHR2-204	ENST00000508085	KRTAP4-6	Q9BYQ5	205 aa		4.59	□□□□□ -1.67
CDHR2-204	ENST00000508085	PSPHP1	O15172	72 aa		4.58	□□□□□ -1.68
CDHR2-204	ENST00000508085		Q1T7F1	81 aa		4.55	□□□□□ -1.68
CDHR2-204	ENST00000508085		V9GYY9	64 aa		4.54	□□□□□ -1.68
CDHR2-204	ENST00000508085	AHNAK2	Q8IVF2	5795 aa		4.53	□□□□□ -1.68
CDHR2-204	ENST00000508085		K7ERS5	55 aa		4.52	□□□□□ -1.69
CDHR2-204	ENST00000508085	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.51	□□□□□ -1.69
CDHR2-204	ENST00000508085	KRTAP5-10	Q6L8G5	202 aa		4.45	□□□□□ -1.7
CDHR2-204	ENST00000508085	LOC100996750	A0A140TA64	210 aa		4.44	□□□□□ -1.7
CDHR2-204	ENST00000508085	KRTAP23-1	A1A580	65 aa		4.43	□□□□□ -1.7
CDHR2-204	ENST00000508085	KRTAP20-2	Q3LI61	65 aa		4.41	□□□□□ -1.7
CDHR2-204	ENST00000508085	KRTAP19-4	Q3LI73	84 aa		4.4	□□□□□ -1.71
CDHR2-204	ENST00000508085		A6NED7	52 aa		4.39	□□□□□ -1.71
CDHR2-204	ENST00000508085	KRTAP15-1	Q3LI76	137 aa		4.39	□□□□□ -1.71
CDHR2-204	ENST00000508085	SPRR5	A0A1B0GTR4	108 aa		4.37	□□□□□ -1.71
CDHR2-204	ENST00000508085	LCE3C	Q5T5A8	94 aa		4.35	□□□□□ -1.71
CDHR2-204	ENST00000508085	KRTAP12-4	P60329	112 aa		4.33	□□□□□ -1.72
CDHR2-204	ENST00000508085	KRTAP5-3	Q6L8H2	238 aa		4.33	□□□□□ -1.72
CDHR2-204	ENST00000508085	CDC42SE1	Q9NRR8	79 aa		4.32	□□□□□ -1.72
CDHR2-204	ENST00000508085	ROMO1	P60602	79 aa		4.27	□□□□□ -1.73
CDHR2-204	ENST00000508085	KRTAP5-7	Q6L8G8	165 aa		4.27	□□□□□ -1.73
CDHR2-204	ENST00000508085	RPS28	P62857	69 aa	Known RBP	4.25	□□□□□ -1.73
CDHR2-204	ENST00000508085	SYNE1	Q8NF91	8797 aa	Known RBP	4.24	□□□□□ -1.73
CDHR2-204	ENST00000508085	MT1A	P04731	61 aa		4.17	□□□□□ -1.74
CDHR2-204	ENST00000508085	KRTAP6-1	Q3LI64	71 aa		4.17	□□□□□ -1.74
CDHR2-204	ENST00000508085	KRTAP9-6	A8MVA2	160 aa		4.15	□□□□□ -1.75
CDHR2-204	ENST00000508085	KRTAP5-2	Q701N4	177 aa		4.12	□□□□□ -1.75
CDHR2-204	ENST00000508085	KRTAP9-4	Q9BYQ2	154 aa		4.02	□□□□□ -1.77
CDHR2-204	ENST00000508085	KRTAP4-11	Q9BYQ6	195 aa		4.02	□□□□□ -1.77
CDHR2-204	ENST00000508085	KRTAP6-2	Q3LI66	62 aa		3.97	□□□□□ -1.77
CDHR2-204	ENST00000508085		H3BS24	57 aa		3.94	□□□□□ -1.78
CDHR2-204	ENST00000508085	KRTAP5-8	O75690	187 aa		3.91	□□□□□ -1.78
CDHR2-204	ENST00000508085	MT3	P25713	68 aa		3.78	□□□□□ -1.8
CDHR2-204	ENST00000508085	PRO0628	Q9UI54	55 aa		3.77	□□□□□ -1.81
CDHR2-204	ENST00000508085	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.73	□□□□□ -1.81
CDHR2-204	ENST00000508085	BRK1	Q8WUW1	75 aa		3.72	□□□□□ -1.81
CDHR2-204	ENST00000508085	MUC5AC	P98088	5654 aa		3.71	□□□□□ -1.82
CDHR2-204	ENST00000508085	OBSCN	Q5VST9	7968 aa		3.69	□□□□□ -1.82
CDHR2-204	ENST00000508085	AHNAK	Q09666	5890 aa	Known RBP	3.68	□□□□□ -1.82
CDHR2-204	ENST00000508085	KRTAP5-1	Q6L8H4	278 aa		3.68	□□□□□ -1.82
CDHR2-204	ENST00000508085	KRTAP9-9	Q9BYP9	154 aa		3.66	□□□□□ -1.82
CDHR2-204	ENST00000508085	PMAIP1	Q13794	54 aa		3.53	□□□□□ -1.84
CDHR2-204	ENST00000508085		A0A0A0MQY5	61 aa		3.49	□□□□□ -1.85
CDHR2-204	ENST00000508085	LCE1E	Q5T753	118 aa		3.49	□□□□□ -1.85
CDHR2-204	ENST00000508085	KTN1-AS1	Q86SY8	53 aa		3.48	□□□□□ -1.85
CDHR2-204	ENST00000508085	PRAC1	Q96KF2	57 aa		3.43	□□□□□ -1.86
CDHR2-204	ENST00000508085	KRTAP4-2	Q9BYR5	136 aa		3.33	□□□□□ -1.88
CDHR2-204	ENST00000508085	LCE1B	Q5T7P3	118 aa		3.28	□□□□□ -1.88
CDHR2-204	ENST00000508085	LCE1C	Q5T751	118 aa		3.25	□□□□□ -1.89
CDHR2-204	ENST00000508085	LCE3D	Q9BYE3	92 aa		3.11	□□□□□ -1.91
CDHR2-204	ENST00000508085	KRTAP4-12	Q9BQ66	201 aa		3.02	□□□□□ -1.93
CDHR2-204	ENST00000508085	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.97	□□□□□ -1.93
CDHR2-204	ENST00000508085	KRTAP5-11	Q6L8G4	156 aa		2.96	□□□□□ -1.94
CDHR2-204	ENST00000508085	LCE3E	Q5T5B0	92 aa		2.92	□□□□□ -1.94
CDHR2-204	ENST00000508085	LCE1F	Q5T754	118 aa		2.85	□□□□□ -1.95
CDHR2-204	ENST00000508085	LUZP6	Q538Z0	58 aa		2.81	□□□□□ -1.96
CDHR2-204	ENST00000508085	KRTAP21-2	Q3LI59	83 aa		2.75	□□□□□ -1.97
CDHR2-204	ENST00000508085	NDUFAF8	A1L188	74 aa		2.62	□□□□□ -1.99
CDHR2-204	ENST00000508085	PHGR1	C9JFL3	82 aa		2.57	□□□□□ -2
CDHR2-204	ENST00000508085	KRTAP4-4	Q9BYR3	166 aa		2.52	□□□□□ -2.01
CDHR2-204	ENST00000508085	INE1	O15225	51 aa		2.32	□□□□□ -2.04
CDHR2-204	ENST00000508085	MUC19	Q7Z5P9	8384 aa		2.27	□□□□□ -2.05
CDHR2-204	ENST00000508085	PRM1	P04553	51 aa		2.19	□□□□□ -2.06
CDHR2-204	ENST00000508085	KRTAP21-1	Q3LI58	79 aa		1.94	□□□□□ -2.1
CDHR2-204	ENST00000508085	MUC16	Q8WXI7	14507 aa		1.71	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 115.8 ms