RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
CLCN3-206ENST00000507875 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.91
CLCN3-206ENST00000507875 KRTAP10-10P60014 251 aa3.09□□□□□ -1.92
CLCN3-206ENST00000507875 KRTAP10-5P60370 271 aa3.08□□□□□ -1.92
CLCN3-206ENST00000507875 MT1FP04733 61 aa3.07□□□□□ -1.92
CLCN3-206ENST00000507875 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
CLCN3-206ENST00000507875 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
CLCN3-206ENST00000507875 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
CLCN3-206ENST00000507875 USH2AO75445 5202 aa3□□□□□ -1.93
CLCN3-206ENST00000507875 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
CLCN3-206ENST00000507875 MT1BP07438 61 aa2.93□□□□□ -1.94
CLCN3-206ENST00000507875 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CLCN3-206ENST00000507875 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
CLCN3-206ENST00000507875 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
CLCN3-206ENST00000507875 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
CLCN3-206ENST00000507875 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
CLCN3-206ENST00000507875 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
CLCN3-206ENST00000507875 TNP1P09430 55 aa2.84□□□□□ -1.96
CLCN3-206ENST00000507875 MT1XP80297 61 aa2.82□□□□□ -1.96
CLCN3-206ENST00000507875 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
CLCN3-206ENST00000507875 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
CLCN3-206ENST00000507875 NEBP20929 6669 aa2.65□□□□□ -1.98
CLCN3-206ENST00000507875 KRTAP5-9P26371 169 aa2.65□□□□□ -1.99
CLCN3-206ENST00000507875 KRTAP8-1Q8IUC2 63 aa2.65□□□□□ -1.99
CLCN3-206ENST00000507875 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
CLCN3-206ENST00000507875 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
CLCN3-206ENST00000507875 KMT2DO14686 5537 aa2.59□□□□□ -1.99
CLCN3-206ENST00000507875 SPRR2FQ96RM1 72 aa2.59□□□□□ -2
CLCN3-206ENST00000507875 KRTAP12-3P60328 96 aa2.58□□□□□ -2
CLCN3-206ENST00000507875 MDN1Q9NU22 5596 aa2.57□□□□□ -2
CLCN3-206ENST00000507875 SPRR2EP22531 72 aa2.55□□□□□ -2
CLCN3-206ENST00000507875 SPRR2BP35325 72 aa2.55□□□□□ -2
CLCN3-206ENST00000507875 SPRR2AP35326 72 aa2.55□□□□□ -2
CLCN3-206ENST00000507875 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CLCN3-206ENST00000507875 KRTAP2-3P0C7H8 128 aa2.53□□□□□ -2
CLCN3-206ENST00000507875 KRTAP2-4Q9BYR9 128 aa2.53□□□□□ -2
CLCN3-206ENST00000507875 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
CLCN3-206ENST00000507875 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
CLCN3-206ENST00000507875 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
CLCN3-206ENST00000507875 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
CLCN3-206ENST00000507875 MT1EP04732 61 aa2.49□□□□□ -2.01
CLCN3-206ENST00000507875 SPRR2DP22532 72 aa2.47□□□□□ -2.01
CLCN3-206ENST00000507875 KRTAP2-1Q9BYU5 128 aa2.45□□□□□ -2.02
CLCN3-206ENST00000507875 MT1LQ93083 61 aa2.43□□□□□ -2.02
CLCN3-206ENST00000507875 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
CLCN3-206ENST00000507875 MT1GP13640 62 aa2.43□□□□□ -2.02
CLCN3-206ENST00000507875 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
CLCN3-206ENST00000507875 MT1MQ8N339 61 aa2.35□□□□□ -2.03
CLCN3-206ENST00000507875 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
CLCN3-206ENST00000507875 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
CLCN3-206ENST00000507875 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
CLCN3-206ENST00000507875 KRTAP5-5Q701N2 237 aaPredicted RBP2.17□□□□□ -2.06
CLCN3-206ENST00000507875 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
CLCN3-206ENST00000507875 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
CLCN3-206ENST00000507875 MT4P47944 62 aa2.14□□□□□ -2.07
CLCN3-206ENST00000507875 MT1AP04731 61 aa2.11□□□□□ -2.07
CLCN3-206ENST00000507875 OBSCNQ5VST9 7968 aa2.06□□□□□ -2.08
CLCN3-206ENST00000507875 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
CLCN3-206ENST00000507875 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
CLCN3-206ENST00000507875 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
CLCN3-206ENST00000507875 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
CLCN3-206ENST00000507875 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
CLCN3-206ENST00000507875 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
CLCN3-206ENST00000507875 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
CLCN3-206ENST00000507875 SYNE1Q8NF91 8797 aaKnown RBP1.95□□□□□ -2.1
CLCN3-206ENST00000507875 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
CLCN3-206ENST00000507875 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
CLCN3-206ENST00000507875 PRM1P04553 51 aa1.92□□□□□ -2.1
CLCN3-206ENST00000507875 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
CLCN3-206ENST00000507875 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
CLCN3-206ENST00000507875 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CLCN3-206ENST00000507875 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
CLCN3-206ENST00000507875 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
CLCN3-206ENST00000507875 MUC5ACP98088 5654 aa1.67□□□□□ -2.14
CLCN3-206ENST00000507875 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
CLCN3-206ENST00000507875 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
CLCN3-206ENST00000507875 PHGR1C9JFL3 82 aa1.19□□□□□ -2.22
CLCN3-206ENST00000507875 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 68.5 ms