RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 SPRR2BP35325 72 aa6.24□□□□□ -1.41
RNF4-209ENST00000507784 SPRR2AP35326 72 aa6.24□□□□□ -1.41
RNF4-209ENST00000507784 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
RNF4-209ENST00000507784 MT1LQ93083 61 aa6.22□□□□□ -1.41
RNF4-209ENST00000507784 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
RNF4-209ENST00000507784 LCE1AQ5T7P2 110 aa6.18□□□□□ -1.42
RNF4-209ENST00000507784 MT1GP13640 62 aa6.13□□□□□ -1.43
RNF4-209ENST00000507784 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
RNF4-209ENST00000507784 MDN1Q9NU22 5596 aa6.09□□□□□ -1.43
RNF4-209ENST00000507784 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
RNF4-209ENST00000507784 MT1MQ8N339 61 aa6.05□□□□□ -1.44
RNF4-209ENST00000507784 NEBP20929 6669 aa6.05□□□□□ -1.44
RNF4-209ENST00000507784 SPRR2DP22532 72 aa6.02□□□□□ -1.45
RNF4-209ENST00000507784 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
RNF4-209ENST00000507784 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
RNF4-209ENST00000507784 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
RNF4-209ENST00000507784 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
RNF4-209ENST00000507784 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
RNF4-209ENST00000507784 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
RNF4-209ENST00000507784 KRTAP20-1Q3LI63 56 aa5.71□□□□□ -1.5
RNF4-209ENST00000507784 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
RNF4-209ENST00000507784 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
RNF4-209ENST00000507784 KRTAP9-6A8MVA2 160 aa5.64□□□□□ -1.51
RNF4-209ENST00000507784 DSTQ03001 7570 aaKnown RBP5.64□□□□□ -1.51
RNF4-209ENST00000507784 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
RNF4-209ENST00000507784 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
RNF4-209ENST00000507784 LUZP6Q538Z0 58 aa5.49□□□□□ -1.53
RNF4-209ENST00000507784 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
RNF4-209ENST00000507784 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
RNF4-209ENST00000507784 MT1AP04731 61 aa5.31□□□□□ -1.56
RNF4-209ENST00000507784 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
RNF4-209ENST00000507784 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
RNF4-209ENST00000507784 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
RNF4-209ENST00000507784 MT4P47944 62 aa5.23□□□□□ -1.57
RNF4-209ENST00000507784 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
RNF4-209ENST00000507784 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
RNF4-209ENST00000507784 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
RNF4-209ENST00000507784 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
RNF4-209ENST00000507784 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
RNF4-209ENST00000507784 KRTAP9-4Q9BYQ2 154 aa5.08□□□□□ -1.6
RNF4-209ENST00000507784 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
RNF4-209ENST00000507784 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
RNF4-209ENST00000507784 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.61
RNF4-209ENST00000507784 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
RNF4-209ENST00000507784 MT3P25713 68 aa4.84□□□□□ -1.63
RNF4-209ENST00000507784 KRTAP5-3Q6L8H2 238 aa4.8□□□□□ -1.64
RNF4-209ENST00000507784 H3BS24 57 aa4.79□□□□□ -1.64
RNF4-209ENST00000507784 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
RNF4-209ENST00000507784 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
RNF4-209ENST00000507784 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
RNF4-209ENST00000507784 AHNAK2Q8IVF2 5795 aa4.57□□□□□ -1.68
RNF4-209ENST00000507784 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
RNF4-209ENST00000507784 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
RNF4-209ENST00000507784 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
RNF4-209ENST00000507784 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
RNF4-209ENST00000507784 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
RNF4-209ENST00000507784 LCE3EQ5T5B0 92 aa4.35□□□□□ -1.71
RNF4-209ENST00000507784 KRTAP4-2Q9BYR5 136 aa4.29□□□□□ -1.72
RNF4-209ENST00000507784 INE1O15225 51 aa4.23□□□□□ -1.73
RNF4-209ENST00000507784 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
RNF4-209ENST00000507784 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
RNF4-209ENST00000507784 KRTAP5-7Q6L8G8 165 aa4.17□□□□□ -1.74
RNF4-209ENST00000507784 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
RNF4-209ENST00000507784 LCE1BQ5T7P3 118 aa4.04□□□□□ -1.76
RNF4-209ENST00000507784 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
RNF4-209ENST00000507784 LCE1CQ5T751 118 aa3.91□□□□□ -1.78
RNF4-209ENST00000507784 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
RNF4-209ENST00000507784 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
RNF4-209ENST00000507784 PRM1P04553 51 aa3.68□□□□□ -1.82
RNF4-209ENST00000507784 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.62□□□□□ -1.83
RNF4-209ENST00000507784 KRTAP5-11Q6L8G4 156 aa3.47□□□□□ -1.85
RNF4-209ENST00000507784 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
RNF4-209ENST00000507784 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
RNF4-209ENST00000507784 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
RNF4-209ENST00000507784 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
RNF4-209ENST00000507784 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
RNF4-209ENST00000507784 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
RNF4-209ENST00000507784 MUC16Q8WXI7 14507 aa1.93□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms