RNA–Protein interactions for RNA: ENST00000507559.1

GNPDA1-209, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 3

Gene GNPDA1, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-209ENST00000507559 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
GNPDA1-209ENST00000507559 KRTAP19-5Q3LI72 72 aa3.62□□□□□ -1.83
GNPDA1-209ENST00000507559 KMT2DO14686 5537 aa3.59□□□□□ -1.83
GNPDA1-209ENST00000507559 MDN1Q9NU22 5596 aa3.59□□□□□ -1.84
GNPDA1-209ENST00000507559 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
GNPDA1-209ENST00000507559 INE1O15225 51 aa3.51□□□□□ -1.85
GNPDA1-209ENST00000507559 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
GNPDA1-209ENST00000507559 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
GNPDA1-209ENST00000507559 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
GNPDA1-209ENST00000507559 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
GNPDA1-209ENST00000507559 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
GNPDA1-209ENST00000507559 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
GNPDA1-209ENST00000507559 MT1EP04732 61 aa3.44□□□□□ -1.86
GNPDA1-209ENST00000507559 SPRR2EP22531 72 aa3.44□□□□□ -1.86
GNPDA1-209ENST00000507559 SPRR2BP35325 72 aa3.44□□□□□ -1.86
GNPDA1-209ENST00000507559 SPRR2AP35326 72 aa3.44□□□□□ -1.86
GNPDA1-209ENST00000507559 MT1LQ93083 61 aa3.41□□□□□ -1.86
GNPDA1-209ENST00000507559 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
GNPDA1-209ENST00000507559 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
GNPDA1-209ENST00000507559 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
GNPDA1-209ENST00000507559 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
GNPDA1-209ENST00000507559 SPRR2DP22532 72 aa3.32□□□□□ -1.88
GNPDA1-209ENST00000507559 MT1GP13640 62 aa3.28□□□□□ -1.88
GNPDA1-209ENST00000507559 KRTAP4-7Q9BYR0 210 aa3.26□□□□□ -1.89
GNPDA1-209ENST00000507559 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
GNPDA1-209ENST00000507559 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
GNPDA1-209ENST00000507559 MT1MQ8N339 61 aa3.21□□□□□ -1.9
GNPDA1-209ENST00000507559 LCE5AQ5TCM9 118 aa3.14□□□□□ -1.91
GNPDA1-209ENST00000507559 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
GNPDA1-209ENST00000507559 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
GNPDA1-209ENST00000507559 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
GNPDA1-209ENST00000507559 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
GNPDA1-209ENST00000507559 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
GNPDA1-209ENST00000507559 LCE1DQ5T752 114 aa3□□□□□ -1.93
GNPDA1-209ENST00000507559 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
GNPDA1-209ENST00000507559 MT1AP04731 61 aa2.93□□□□□ -1.94
GNPDA1-209ENST00000507559 MT4P47944 62 aa2.92□□□□□ -1.94
GNPDA1-209ENST00000507559 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
GNPDA1-209ENST00000507559 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
GNPDA1-209ENST00000507559 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
GNPDA1-209ENST00000507559 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
GNPDA1-209ENST00000507559 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
GNPDA1-209ENST00000507559 KRTAP12-4P60329 112 aa2.85□□□□□ -1.95
GNPDA1-209ENST00000507559 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
GNPDA1-209ENST00000507559 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.95
GNPDA1-209ENST00000507559 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
GNPDA1-209ENST00000507559 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
GNPDA1-209ENST00000507559 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
GNPDA1-209ENST00000507559 KRTAP9-4Q9BYQ2 154 aa2.74□□□□□ -1.97
GNPDA1-209ENST00000507559 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
GNPDA1-209ENST00000507559 KRTAP20-2Q3LI61 65 aa2.72□□□□□ -1.97
GNPDA1-209ENST00000507559 MT3P25713 68 aa2.66□□□□□ -1.98
GNPDA1-209ENST00000507559 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
GNPDA1-209ENST00000507559 KRTAP6-2Q3LI66 62 aa2.57□□□□□ -2
GNPDA1-209ENST00000507559 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
GNPDA1-209ENST00000507559 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
GNPDA1-209ENST00000507559 PRM1P04553 51 aa2.48□□□□□ -2.01
GNPDA1-209ENST00000507559 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
GNPDA1-209ENST00000507559 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
GNPDA1-209ENST00000507559 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.03
GNPDA1-209ENST00000507559 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
GNPDA1-209ENST00000507559 OBSCNQ5VST9 7968 aa2.36□□□□□ -2.03
GNPDA1-209ENST00000507559 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
GNPDA1-209ENST00000507559 KRTAP9-9Q9BYP9 154 aa2.34□□□□□ -2.03
GNPDA1-209ENST00000507559 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
GNPDA1-209ENST00000507559 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
GNPDA1-209ENST00000507559 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
GNPDA1-209ENST00000507559 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
GNPDA1-209ENST00000507559 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
GNPDA1-209ENST00000507559 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.99□□□□□ -2.09
GNPDA1-209ENST00000507559 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
GNPDA1-209ENST00000507559 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
GNPDA1-209ENST00000507559 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
GNPDA1-209ENST00000507559 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
GNPDA1-209ENST00000507559 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
GNPDA1-209ENST00000507559 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
GNPDA1-209ENST00000507559 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
GNPDA1-209ENST00000507559 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 37.2 ms