RNA–Protein interactions for RNA: ENST00000507395.1

SFXN1-207, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-207ENST00000507395 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
SFXN1-207ENST00000507395 HMCN1Q96RW7 5635 aa6.18□□□□□ -1.42
SFXN1-207ENST00000507395 TNP1P09430 55 aa6.18□□□□□ -1.42
SFXN1-207ENST00000507395 KRTAP4-3Q9BYR4 195 aa6.17□□□□□ -1.42
SFXN1-207ENST00000507395 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
SFXN1-207ENST00000507395 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
SFXN1-207ENST00000507395 KRTAP5-4Q6L8H1 288 aa6.1□□□□□ -1.43
SFXN1-207ENST00000507395 ATP5EP56381 51 aaPredicted RBP6.09□□□□□ -1.43
SFXN1-207ENST00000507395 MT4P47944 62 aa6.08□□□□□ -1.44
SFXN1-207ENST00000507395 PRR15LQ9BU68 103 aa6.08□□□□□ -1.44
SFXN1-207ENST00000507395 KRTAP4-7Q9BYR0 210 aa6.01□□□□□ -1.45
SFXN1-207ENST00000507395 KRTAP12-3P60328 96 aa5.98□□□□□ -1.45
SFXN1-207ENST00000507395 AHNAK2Q8IVF2 5795 aa5.97□□□□□ -1.45
SFXN1-207ENST00000507395 UQCR11O14957 56 aa5.93□□□□□ -1.46
SFXN1-207ENST00000507395 TMEM258P61165 79 aa5.91□□□□□ -1.46
SFXN1-207ENST00000507395 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
SFXN1-207ENST00000507395 KRTAP5-5Q701N2 237 aaPredicted RBP5.84□□□□□ -1.47
SFXN1-207ENST00000507395 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
SFXN1-207ENST00000507395 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
SFXN1-207ENST00000507395 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
SFXN1-207ENST00000507395 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
SFXN1-207ENST00000507395 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
SFXN1-207ENST00000507395 KRTAP4-2Q9BYR5 136 aa5.67□□□□□ -1.5
SFXN1-207ENST00000507395 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.51
SFXN1-207ENST00000507395 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
SFXN1-207ENST00000507395 PSPHP1O15172 72 aa5.62□□□□□ -1.51
SFXN1-207ENST00000507395 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
SFXN1-207ENST00000507395 Q1T7F1 81 aa5.61□□□□□ -1.51
SFXN1-207ENST00000507395 KRTAP5-7Q6L8G8 165 aa5.61□□□□□ -1.51
SFXN1-207ENST00000507395 K7ERS5 55 aa5.6□□□□□ -1.51
SFXN1-207ENST00000507395 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
SFXN1-207ENST00000507395 V9GYY9 64 aa5.58□□□□□ -1.52
SFXN1-207ENST00000507395 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
SFXN1-207ENST00000507395 KRTAP4-11Q9BYQ6 195 aa5.55□□□□□ -1.52
SFXN1-207ENST00000507395 LCE3CQ5T5A8 94 aa5.52□□□□□ -1.53
SFXN1-207ENST00000507395 A6NED7 52 aa5.38□□□□□ -1.55
SFXN1-207ENST00000507395 MT1AP04731 61 aa5.35□□□□□ -1.55
SFXN1-207ENST00000507395 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
SFXN1-207ENST00000507395 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
SFXN1-207ENST00000507395 KRTAP5-2Q701N4 177 aa5.33□□□□□ -1.56
SFXN1-207ENST00000507395 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
SFXN1-207ENST00000507395 ROMO1P60602 79 aa5.29□□□□□ -1.56
SFXN1-207ENST00000507395 H3BS24 57 aa5.21□□□□□ -1.58
SFXN1-207ENST00000507395 RPS28P62857 69 aaKnown RBP5.19□□□□□ -1.58
SFXN1-207ENST00000507395 KRTAP5-8O75690 187 aa5.1□□□□□ -1.59
SFXN1-207ENST00000507395 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
SFXN1-207ENST00000507395 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
SFXN1-207ENST00000507395 MUC5BQ9HC84 5762 aaPredicted RBP4.95□□□□□ -1.62
SFXN1-207ENST00000507395 PCP4P48539 62 aa4.94□□□□□ -1.62
SFXN1-207ENST00000507395 AHNAKQ09666 5890 aaKnown RBP4.91□□□□□ -1.62
SFXN1-207ENST00000507395 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
SFXN1-207ENST00000507395 MT3P25713 68 aa4.87□□□□□ -1.63
SFXN1-207ENST00000507395 KRTAP5-1Q6L8H4 278 aa4.8□□□□□ -1.64
SFXN1-207ENST00000507395 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
SFXN1-207ENST00000507395 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
SFXN1-207ENST00000507395 LCE1CQ5T751 118 aa4.21□□□□□ -1.74
SFXN1-207ENST00000507395 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
SFXN1-207ENST00000507395 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
SFXN1-207ENST00000507395 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
SFXN1-207ENST00000507395 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
SFXN1-207ENST00000507395 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
SFXN1-207ENST00000507395 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
SFXN1-207ENST00000507395 LCE1FQ5T754 118 aa3.72□□□□□ -1.81
SFXN1-207ENST00000507395 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
SFXN1-207ENST00000507395 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
SFXN1-207ENST00000507395 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
SFXN1-207ENST00000507395 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
SFXN1-207ENST00000507395 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
SFXN1-207ENST00000507395 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
SFXN1-207ENST00000507395 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
SFXN1-207ENST00000507395 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
SFXN1-207ENST00000507395 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
SFXN1-207ENST00000507395 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
SFXN1-207ENST00000507395 PRM1P04553 51 aa2.71□□□□□ -1.98
SFXN1-207ENST00000507395 NDUFAF8A1L188 74 aa2.57□□□□□ -2
SFXN1-207ENST00000507395 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
SFXN1-207ENST00000507395 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
SFXN1-207ENST00000507395 INE1O15225 51 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 85.7 ms