RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 HSD52Q0P140 79 aa2.31□□□□□ -2.04
VCAN-207ENST00000507162 SMIM20Q8N5G0 67 aa2.31□□□□□ -2.04
VCAN-207ENST00000507162 A0A1B0GU33 70 aa2.29□□□□□ -2.04
VCAN-207ENST00000507162 LOC105371267A0A1B0GV96 52 aa2.27□□□□□ -2.05
VCAN-207ENST00000507162 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
VCAN-207ENST00000507162 TSTD3H0UI37 97 aa2.26□□□□□ -2.05
VCAN-207ENST00000507162 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
VCAN-207ENST00000507162 SPCS1Q9Y6A9 102 aa2.24□□□□□ -2.05
VCAN-207ENST00000507162 H3BPC8 53 aa2.22□□□□□ -2.05
VCAN-207ENST00000507162 HIST1H4AP62805 103 aaKnown RBP2.22□□□□□ -2.05
VCAN-207ENST00000507162 UBL5Q9BZL1 73 aa2.22□□□□□ -2.05
VCAN-207ENST00000507162 H0Y9P7 68 aa2.21□□□□□ -2.06
VCAN-207ENST00000507162 S100A1P23297 94 aa2.21□□□□□ -2.06
VCAN-207ENST00000507162 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
VCAN-207ENST00000507162 ATOX1O00244 68 aa2.18□□□□□ -2.06
VCAN-207ENST00000507162 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
VCAN-207ENST00000507162 H3BT86 120 aa2.16□□□□□ -2.06
VCAN-207ENST00000507162 SCGB1A1P11684 91 aa2.16□□□□□ -2.06
VCAN-207ENST00000507162 UQCRQO14949 82 aa2.15□□□□□ -2.07
VCAN-207ENST00000507162 KRTAP6-2Q3LI66 62 aa2.15□□□□□ -2.07
VCAN-207ENST00000507162 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
VCAN-207ENST00000507162 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
VCAN-207ENST00000507162 KRTAP6-1Q3LI64 71 aa2.14□□□□□ -2.07
VCAN-207ENST00000507162 LINC00208Q96KT6 92 aa2.14□□□□□ -2.07
VCAN-207ENST00000507162 TAX1BP3O14907 124 aa2.13□□□□□ -2.07
VCAN-207ENST00000507162 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
VCAN-207ENST00000507162 UQCR10Q9UDW1 63 aa2.11□□□□□ -2.07
VCAN-207ENST00000507162 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
VCAN-207ENST00000507162 MT1AP04731 61 aa2.09□□□□□ -2.07
VCAN-207ENST00000507162 DMAC1Q96GE9 116 aa2.09□□□□□ -2.07
VCAN-207ENST00000507162 RPS28P62857 69 aaKnown RBP2.07□□□□□ -2.08
VCAN-207ENST00000507162 SPTSSBQ8NFR3 76 aa2.07□□□□□ -2.08
VCAN-207ENST00000507162 TNP1P09430 55 aa2.04□□□□□ -2.08
VCAN-207ENST00000507162 TMEM258P61165 79 aa2.04□□□□□ -2.08
VCAN-207ENST00000507162 M0R143 59 aa2.02□□□□□ -2.09
VCAN-207ENST00000507162 ACYP2P14621 99 aa2□□□□□ -2.09
VCAN-207ENST00000507162 PYY3Q5JQD4 70 aa2□□□□□ -2.09
VCAN-207ENST00000507162 PRO0461Q9UI25 63 aa2□□□□□ -2.09
VCAN-207ENST00000507162 CHKB-CPT1BH3BT56 60 aa1.99□□□□□ -2.09
VCAN-207ENST00000507162 KRTAP12-1P59990 96 aa1.97□□□□□ -2.09
VCAN-207ENST00000507162 SPATA8Q6RVD6 105 aa1.97□□□□□ -2.09
VCAN-207ENST00000507162 ROMO1P60602 79 aa1.94□□□□□ -2.1
VCAN-207ENST00000507162 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
VCAN-207ENST00000507162 Q1T7F1 81 aa1.9□□□□□ -2.11
VCAN-207ENST00000507162 LCE1BQ5T7P3 118 aa1.9□□□□□ -2.11
VCAN-207ENST00000507162 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
VCAN-207ENST00000507162 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
VCAN-207ENST00000507162 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
VCAN-207ENST00000507162 SERP1Q9Y6X1 66 aa1.84□□□□□ -2.11
VCAN-207ENST00000507162 ATP5EP2Q5VTU8 51 aa1.83□□□□□ -2.12
VCAN-207ENST00000507162 J3QR89 54 aa1.82□□□□□ -2.12
VCAN-207ENST00000507162 COA5Q86WW8 74 aa1.82□□□□□ -2.12
VCAN-207ENST00000507162 K7ERU9 68 aa1.8□□□□□ -2.12
VCAN-207ENST00000507162 A0A1B0GV90 55 aa1.79□□□□□ -2.12
VCAN-207ENST00000507162 ETDBQ3ZM63 59 aa1.79□□□□□ -2.12
VCAN-207ENST00000507162 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
VCAN-207ENST00000507162 COX7CP15954 63 aa1.74□□□□□ -2.13
VCAN-207ENST00000507162 F8W1H4 67 aa1.73□□□□□ -2.13
VCAN-207ENST00000507162 CDC42SE1Q9NRR8 79 aa1.71□□□□□ -2.14
VCAN-207ENST00000507162 LINC00643Q86TS7 51 aa1.69□□□□□ -2.14
VCAN-207ENST00000507162 INE1O15225 51 aa1.68□□□□□ -2.14
VCAN-207ENST00000507162 SERP2Q8N6R1 65 aa1.67□□□□□ -2.14
VCAN-207ENST00000507162 SNURFQ9Y675 71 aa1.66□□□□□ -2.14
VCAN-207ENST00000507162 GTF2H5Q6ZYL4 71 aa1.64□□□□□ -2.15
VCAN-207ENST00000507162 CCDC179H3BU77 68 aa1.61□□□□□ -2.15
VCAN-207ENST00000507162 COL5A1-AS1Q5SY13 56 aa1.6□□□□□ -2.15
VCAN-207ENST00000507162 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
VCAN-207ENST00000507162 A0A1B0GU69 56 aa1.57□□□□□ -2.16
VCAN-207ENST00000507162 H7BZZ5 65 aa1.56□□□□□ -2.16
VCAN-207ENST00000507162 SMIM6P0DI80 62 aa1.54□□□□□ -2.16
VCAN-207ENST00000507162 PRR15LQ9BU68 103 aa1.47□□□□□ -2.17
VCAN-207ENST00000507162 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
VCAN-207ENST00000507162 ATP5EP56381 51 aaPredicted RBP1.39□□□□□ -2.19
VCAN-207ENST00000507162 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
VCAN-207ENST00000507162 UQCR11O14957 56 aa1.3□□□□□ -2.2
VCAN-207ENST00000507162 LINC01558Q9Y6Z2 57 aa1.2□□□□□ -2.22
VCAN-207ENST00000507162 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
VCAN-207ENST00000507162 PRM1P04553 51 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 41.1 ms