RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
PDE4D-216ENST00000507116 KRTAP9-6A8MVA2 160 aa2.05□□□□□ -2.08
PDE4D-216ENST00000507116 KRTAP19-2Q3LHN2 52 aa2.05□□□□□ -2.08
PDE4D-216ENST00000507116 KRTAP4-7Q9BYR0 210 aa2.05□□□□□ -2.08
PDE4D-216ENST00000507116 SPRR2GQ9BYE4 73 aa2.02□□□□□ -2.09
PDE4D-216ENST00000507116 MT2AP02795 61 aa2.01□□□□□ -2.09
PDE4D-216ENST00000507116 KRTAP4-9Q9BYQ8 210 aa2.01□□□□□ -2.09
PDE4D-216ENST00000507116 MT1FP04733 61 aa2□□□□□ -2.09
PDE4D-216ENST00000507116 SSPOA2VEC9 5147 aa2□□□□□ -2.09
PDE4D-216ENST00000507116 SYNE2Q8WXH0 6885 aaKnown RBP1.99□□□□□ -2.09
PDE4D-216ENST00000507116 KRTAP19-5Q3LI72 72 aa1.99□□□□□ -2.09
PDE4D-216ENST00000507116 FCGBPQ9Y6R7 5405 aaPredicted RBP1.98□□□□□ -2.09
PDE4D-216ENST00000507116 KRTAP9-8Q9BYQ0 159 aa1.98□□□□□ -2.09
PDE4D-216ENST00000507116 LCE4AQ5TA78 99 aa1.96□□□□□ -2.1
PDE4D-216ENST00000507116 KRTAP9-7A8MTY7 169 aa1.96□□□□□ -2.1
PDE4D-216ENST00000507116 PRM1P04553 51 aa1.95□□□□□ -2.1
PDE4D-216ENST00000507116 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
PDE4D-216ENST00000507116 KRTAP4-11Q9BYQ6 195 aa1.94□□□□□ -2.1
PDE4D-216ENST00000507116 KRTAP4-2Q9BYR5 136 aa1.93□□□□□ -2.1
PDE4D-216ENST00000507116 KRTAP9-3Q9BYQ3 159 aa1.92□□□□□ -2.1
PDE4D-216ENST00000507116 KMT2DO14686 5537 aa1.9□□□□□ -2.1
PDE4D-216ENST00000507116 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
PDE4D-216ENST00000507116 MT1XP80297 61 aa1.89□□□□□ -2.11
PDE4D-216ENST00000507116 MT3P25713 68 aa1.87□□□□□ -2.11
PDE4D-216ENST00000507116 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.12
PDE4D-216ENST00000507116 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
PDE4D-216ENST00000507116 MDN1Q9NU22 5596 aa1.83□□□□□ -2.12
PDE4D-216ENST00000507116 KRTAP5-5Q701N2 237 aaPredicted RBP1.82□□□□□ -2.12
PDE4D-216ENST00000507116 KRTAP19-6Q3LI70 58 aa1.81□□□□□ -2.12
PDE4D-216ENST00000507116 DSTQ03001 7570 aaKnown RBP1.8□□□□□ -2.12
PDE4D-216ENST00000507116 LCE3EQ5T5B0 92 aa1.79□□□□□ -2.12
PDE4D-216ENST00000507116 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
PDE4D-216ENST00000507116 MT1BP07438 61 aa1.79□□□□□ -2.12
PDE4D-216ENST00000507116 OBSCNQ5VST9 7968 aa1.78□□□□□ -2.12
PDE4D-216ENST00000507116 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
PDE4D-216ENST00000507116 MT1AP04731 61 aa1.77□□□□□ -2.13
PDE4D-216ENST00000507116 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
PDE4D-216ENST00000507116 SPRR2EP22531 72 aa1.74□□□□□ -2.13
PDE4D-216ENST00000507116 SPRR2BP35325 72 aa1.74□□□□□ -2.13
PDE4D-216ENST00000507116 SPRR2AP35326 72 aa1.74□□□□□ -2.13
PDE4D-216ENST00000507116 NEBP20929 6669 aa1.74□□□□□ -2.13
PDE4D-216ENST00000507116 KRTAP5-3Q6L8H2 238 aa1.72□□□□□ -2.13
PDE4D-216ENST00000507116 KRTAP20-1Q3LI63 56 aa1.72□□□□□ -2.13
PDE4D-216ENST00000507116 MT1EP04732 61 aa1.71□□□□□ -2.14
PDE4D-216ENST00000507116 MT1LQ93083 61 aa1.7□□□□□ -2.14
PDE4D-216ENST00000507116 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
PDE4D-216ENST00000507116 SPRR2DP22532 72 aa1.67□□□□□ -2.14
PDE4D-216ENST00000507116 KRTAP19-7Q3SYF9 63 aa1.67□□□□□ -2.14
PDE4D-216ENST00000507116 MT1GP13640 62 aa1.61□□□□□ -2.15
PDE4D-216ENST00000507116 KRTAP5-9P26371 169 aa1.6□□□□□ -2.15
PDE4D-216ENST00000507116 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
PDE4D-216ENST00000507116 GPR98Q8WXG9 6306 aa1.55□□□□□ -2.16
PDE4D-216ENST00000507116 MT4P47944 62 aa1.54□□□□□ -2.16
PDE4D-216ENST00000507116 KRTAP4-3Q9BYR4 195 aa1.52□□□□□ -2.17
PDE4D-216ENST00000507116 KRTAP19-3Q7Z4W3 81 aa1.5□□□□□ -2.17
PDE4D-216ENST00000507116 MT1MQ8N339 61 aa1.45□□□□□ -2.18
PDE4D-216ENST00000507116 KRTAP6-1Q3LI64 71 aa1.42□□□□□ -2.18
PDE4D-216ENST00000507116 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
PDE4D-216ENST00000507116 LCE1CQ5T751 118 aa1.42□□□□□ -2.18
PDE4D-216ENST00000507116 LCE1BQ5T7P3 118 aa1.42□□□□□ -2.18
PDE4D-216ENST00000507116 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
PDE4D-216ENST00000507116 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
PDE4D-216ENST00000507116 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
PDE4D-216ENST00000507116 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
PDE4D-216ENST00000507116 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.28□□□□□ -2.21
PDE4D-216ENST00000507116 KRTAP5-11Q6L8G4 156 aa1.26□□□□□ -2.21
PDE4D-216ENST00000507116 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
PDE4D-216ENST00000507116 KRTAP5-7Q6L8G8 165 aa1.24□□□□□ -2.21
PDE4D-216ENST00000507116 KRTAP5-4Q6L8H1 288 aa1.24□□□□□ -2.21
PDE4D-216ENST00000507116 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
PDE4D-216ENST00000507116 KRTAP5-2Q701N4 177 aa1.22□□□□□ -2.21
PDE4D-216ENST00000507116 KRTAP5-8O75690 187 aa1.14□□□□□ -2.23
PDE4D-216ENST00000507116 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
PDE4D-216ENST00000507116 KRTAP4-4Q9BYR3 166 aa1.05□□□□□ -2.24
PDE4D-216ENST00000507116 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
PDE4D-216ENST00000507116 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
PDE4D-216ENST00000507116 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 108.8 ms