RNA–Protein interactions for RNA: ENST00000506841.6

HTR3A-206, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-206ENST00000506841 KRTAP19-6Q3LI70 58 aa5□□□□□ -1.61
HTR3A-206ENST00000506841 FSIP2Q5CZC0 6907 aa4.99□□□□□ -1.61
HTR3A-206ENST00000506841 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
HTR3A-206ENST00000506841 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.64
HTR3A-206ENST00000506841 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
HTR3A-206ENST00000506841 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
HTR3A-206ENST00000506841 MT1GP13640 62 aa4.78□□□□□ -1.64
HTR3A-206ENST00000506841 MT1MQ8N339 61 aa4.78□□□□□ -1.64
HTR3A-206ENST00000506841 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
HTR3A-206ENST00000506841 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
HTR3A-206ENST00000506841 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
HTR3A-206ENST00000506841 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
HTR3A-206ENST00000506841 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
HTR3A-206ENST00000506841 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
HTR3A-206ENST00000506841 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.53□□□□□ -1.68
HTR3A-206ENST00000506841 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
HTR3A-206ENST00000506841 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
HTR3A-206ENST00000506841 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
HTR3A-206ENST00000506841 LCE3BQ5TA77 95 aa4.42□□□□□ -1.7
HTR3A-206ENST00000506841 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
HTR3A-206ENST00000506841 KRTAP5-9P26371 169 aa4.37□□□□□ -1.71
HTR3A-206ENST00000506841 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
HTR3A-206ENST00000506841 KRTAP9-7A8MTY7 169 aa4.34□□□□□ -1.72
HTR3A-206ENST00000506841 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
HTR3A-206ENST00000506841 MT1AP04731 61 aa4.32□□□□□ -1.72
HTR3A-206ENST00000506841 LCE1AQ5T7P2 110 aa4.26□□□□□ -1.73
HTR3A-206ENST00000506841 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
HTR3A-206ENST00000506841 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
HTR3A-206ENST00000506841 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
HTR3A-206ENST00000506841 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
HTR3A-206ENST00000506841 SPRR2EP22531 72 aa4.14□□□□□ -1.75
HTR3A-206ENST00000506841 SPRR2BP35325 72 aa4.14□□□□□ -1.75
HTR3A-206ENST00000506841 SPRR2AP35326 72 aa4.14□□□□□ -1.75
HTR3A-206ENST00000506841 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
HTR3A-206ENST00000506841 NEBP20929 6669 aa4.12□□□□□ -1.75
HTR3A-206ENST00000506841 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
HTR3A-206ENST00000506841 SPRR2DP22532 72 aa3.97□□□□□ -1.77
HTR3A-206ENST00000506841 PRM1P04553 51 aa3.97□□□□□ -1.77
HTR3A-206ENST00000506841 KRTAP6-2Q3LI66 62 aa3.89□□□□□ -1.79
HTR3A-206ENST00000506841 MT3P25713 68 aa3.86□□□□□ -1.79
HTR3A-206ENST00000506841 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
HTR3A-206ENST00000506841 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
HTR3A-206ENST00000506841 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
HTR3A-206ENST00000506841 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
HTR3A-206ENST00000506841 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
HTR3A-206ENST00000506841 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
HTR3A-206ENST00000506841 MT4P47944 62 aa3.48□□□□□ -1.85
HTR3A-206ENST00000506841 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
HTR3A-206ENST00000506841 KRTAP20-2Q3LI61 65 aa3.46□□□□□ -1.86
HTR3A-206ENST00000506841 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
HTR3A-206ENST00000506841 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
HTR3A-206ENST00000506841 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
HTR3A-206ENST00000506841 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
HTR3A-206ENST00000506841 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
HTR3A-206ENST00000506841 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
HTR3A-206ENST00000506841 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
HTR3A-206ENST00000506841 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
HTR3A-206ENST00000506841 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
HTR3A-206ENST00000506841 GPR98Q8WXG9 6306 aa3.03□□□□□ -1.92
HTR3A-206ENST00000506841 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
HTR3A-206ENST00000506841 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
HTR3A-206ENST00000506841 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
HTR3A-206ENST00000506841 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
HTR3A-206ENST00000506841 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
HTR3A-206ENST00000506841 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
HTR3A-206ENST00000506841 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
HTR3A-206ENST00000506841 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
HTR3A-206ENST00000506841 KRTAP4-12Q9BQ66 201 aa2.66□□□□□ -1.98
HTR3A-206ENST00000506841 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
HTR3A-206ENST00000506841 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
HTR3A-206ENST00000506841 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
HTR3A-206ENST00000506841 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
HTR3A-206ENST00000506841 KRTAP21-1Q3LI58 79 aa2.51□□□□□ -2.01
HTR3A-206ENST00000506841 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
HTR3A-206ENST00000506841 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
HTR3A-206ENST00000506841 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
HTR3A-206ENST00000506841 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 63.3 ms