RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 KRTAP9-6A8MVA2 160 aa4.25□□□□□ -1.73
LIN54-206ENST00000506560 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
LIN54-206ENST00000506560 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
LIN54-206ENST00000506560 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
LIN54-206ENST00000506560 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
LIN54-206ENST00000506560 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
LIN54-206ENST00000506560 INE1O15225 51 aa4.13□□□□□ -1.75
LIN54-206ENST00000506560 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
LIN54-206ENST00000506560 MT1MQ8N339 61 aa4.1□□□□□ -1.75
LIN54-206ENST00000506560 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
LIN54-206ENST00000506560 MT1GP13640 62 aa4.06□□□□□ -1.76
LIN54-206ENST00000506560 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
LIN54-206ENST00000506560 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
LIN54-206ENST00000506560 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
LIN54-206ENST00000506560 LCE1AQ5T7P2 110 aa3.95□□□□□ -1.78
LIN54-206ENST00000506560 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.91□□□□□ -1.78
LIN54-206ENST00000506560 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
LIN54-206ENST00000506560 SPRR2EP22531 72 aa3.89□□□□□ -1.79
LIN54-206ENST00000506560 SPRR2BP35325 72 aa3.89□□□□□ -1.79
LIN54-206ENST00000506560 SPRR2AP35326 72 aa3.89□□□□□ -1.79
LIN54-206ENST00000506560 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
LIN54-206ENST00000506560 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
LIN54-206ENST00000506560 KRTAP2-1Q9BYU5 128 aa3.87□□□□□ -1.79
LIN54-206ENST00000506560 KRTAP4-6Q9BYQ5 205 aa3.84□□□□□ -1.8
LIN54-206ENST00000506560 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
LIN54-206ENST00000506560 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
LIN54-206ENST00000506560 SPRR2DP22532 72 aa3.72□□□□□ -1.81
LIN54-206ENST00000506560 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
LIN54-206ENST00000506560 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
LIN54-206ENST00000506560 LCE3BQ5TA77 95 aa3.65□□□□□ -1.83
LIN54-206ENST00000506560 NEBP20929 6669 aa3.64□□□□□ -1.83
LIN54-206ENST00000506560 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
LIN54-206ENST00000506560 MT1AP04731 61 aa3.6□□□□□ -1.83
LIN54-206ENST00000506560 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
LIN54-206ENST00000506560 KRTAP12-4P60329 112 aa3.47□□□□□ -1.85
LIN54-206ENST00000506560 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
LIN54-206ENST00000506560 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
LIN54-206ENST00000506560 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
LIN54-206ENST00000506560 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
LIN54-206ENST00000506560 MT4P47944 62 aa3.32□□□□□ -1.88
LIN54-206ENST00000506560 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
LIN54-206ENST00000506560 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.89
LIN54-206ENST00000506560 MT3P25713 68 aa3.23□□□□□ -1.89
LIN54-206ENST00000506560 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
LIN54-206ENST00000506560 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
LIN54-206ENST00000506560 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
LIN54-206ENST00000506560 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
LIN54-206ENST00000506560 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
LIN54-206ENST00000506560 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
LIN54-206ENST00000506560 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
LIN54-206ENST00000506560 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
LIN54-206ENST00000506560 PRM1P04553 51 aa3.09□□□□□ -1.92
LIN54-206ENST00000506560 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
LIN54-206ENST00000506560 KRTAP5-3Q6L8H2 238 aa3.05□□□□□ -1.92
LIN54-206ENST00000506560 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
LIN54-206ENST00000506560 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
LIN54-206ENST00000506560 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
LIN54-206ENST00000506560 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
LIN54-206ENST00000506560 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
LIN54-206ENST00000506560 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
LIN54-206ENST00000506560 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
LIN54-206ENST00000506560 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
LIN54-206ENST00000506560 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
LIN54-206ENST00000506560 LCE1CQ5T751 118 aa2.56□□□□□ -2
LIN54-206ENST00000506560 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
LIN54-206ENST00000506560 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
LIN54-206ENST00000506560 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
LIN54-206ENST00000506560 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
LIN54-206ENST00000506560 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.38□□□□□ -2.03
LIN54-206ENST00000506560 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
LIN54-206ENST00000506560 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
LIN54-206ENST00000506560 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
LIN54-206ENST00000506560 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
LIN54-206ENST00000506560 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
LIN54-206ENST00000506560 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
LIN54-206ENST00000506560 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
LIN54-206ENST00000506560 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 26.4 ms