RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
SERF1B-204ENST00000506542 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
SERF1B-204ENST00000506542 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
SERF1B-204ENST00000506542 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
SERF1B-204ENST00000506542 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
SERF1B-204ENST00000506542 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
SERF1B-204ENST00000506542 SPRR2EP22531 72 aa5.34□□□□□ -1.55
SERF1B-204ENST00000506542 SPRR2BP35325 72 aa5.34□□□□□ -1.55
SERF1B-204ENST00000506542 SPRR2AP35326 72 aa5.34□□□□□ -1.55
SERF1B-204ENST00000506542 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
SERF1B-204ENST00000506542 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
SERF1B-204ENST00000506542 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
SERF1B-204ENST00000506542 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
SERF1B-204ENST00000506542 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
SERF1B-204ENST00000506542 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
SERF1B-204ENST00000506542 SPRR2DP22532 72 aa5.15□□□□□ -1.58
SERF1B-204ENST00000506542 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
SERF1B-204ENST00000506542 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
SERF1B-204ENST00000506542 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
SERF1B-204ENST00000506542 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
SERF1B-204ENST00000506542 MT1EP04732 61 aa5.07□□□□□ -1.6
SERF1B-204ENST00000506542 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
SERF1B-204ENST00000506542 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
SERF1B-204ENST00000506542 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
SERF1B-204ENST00000506542 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
SERF1B-204ENST00000506542 KRTAP2-1Q9BYU5 128 aa4.99□□□□□ -1.61
SERF1B-204ENST00000506542 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
SERF1B-204ENST00000506542 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.62
SERF1B-204ENST00000506542 MT1LQ93083 61 aa4.89□□□□□ -1.63
SERF1B-204ENST00000506542 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
SERF1B-204ENST00000506542 MT1GP13640 62 aa4.83□□□□□ -1.64
SERF1B-204ENST00000506542 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
SERF1B-204ENST00000506542 MT1MQ8N339 61 aa4.82□□□□□ -1.64
SERF1B-204ENST00000506542 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
SERF1B-204ENST00000506542 KRTAP4-3Q9BYR4 195 aa4.81□□□□□ -1.64
SERF1B-204ENST00000506542 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
SERF1B-204ENST00000506542 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SERF1B-204ENST00000506542 MT3P25713 68 aa4.63□□□□□ -1.67
SERF1B-204ENST00000506542 INE1O15225 51 aa4.61□□□□□ -1.67
SERF1B-204ENST00000506542 KRTAP9-6A8MVA2 160 aa4.57□□□□□ -1.68
SERF1B-204ENST00000506542 MT4P47944 62 aa4.55□□□□□ -1.68
SERF1B-204ENST00000506542 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
SERF1B-204ENST00000506542 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
SERF1B-204ENST00000506542 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
SERF1B-204ENST00000506542 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
SERF1B-204ENST00000506542 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
SERF1B-204ENST00000506542 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.71
SERF1B-204ENST00000506542 AHNAK2Q8IVF2 5795 aa4.32□□□□□ -1.72
SERF1B-204ENST00000506542 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
SERF1B-204ENST00000506542 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
SERF1B-204ENST00000506542 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SERF1B-204ENST00000506542 MT1AP04731 61 aa4.17□□□□□ -1.74
SERF1B-204ENST00000506542 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
SERF1B-204ENST00000506542 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
SERF1B-204ENST00000506542 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SERF1B-204ENST00000506542 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
SERF1B-204ENST00000506542 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
SERF1B-204ENST00000506542 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
SERF1B-204ENST00000506542 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SERF1B-204ENST00000506542 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SERF1B-204ENST00000506542 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
SERF1B-204ENST00000506542 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
SERF1B-204ENST00000506542 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
SERF1B-204ENST00000506542 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
SERF1B-204ENST00000506542 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
SERF1B-204ENST00000506542 AHNAKQ09666 5890 aaKnown RBP3.48□□□□□ -1.85
SERF1B-204ENST00000506542 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
SERF1B-204ENST00000506542 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SERF1B-204ENST00000506542 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SERF1B-204ENST00000506542 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SERF1B-204ENST00000506542 PRM1P04553 51 aa3.04□□□□□ -1.92
SERF1B-204ENST00000506542 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SERF1B-204ENST00000506542 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
SERF1B-204ENST00000506542 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
SERF1B-204ENST00000506542 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SERF1B-204ENST00000506542 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
SERF1B-204ENST00000506542 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 44.7 ms