RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 MUC12Q9UKN1 5478 aa4.44□□□□□ -1.7
ITGA3-208ENST00000506437 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.7
ITGA3-208ENST00000506437 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
ITGA3-208ENST00000506437 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
ITGA3-208ENST00000506437 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
ITGA3-208ENST00000506437 MDN1Q9NU22 5596 aa4.32□□□□□ -1.72
ITGA3-208ENST00000506437 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
ITGA3-208ENST00000506437 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
ITGA3-208ENST00000506437 DSTQ03001 7570 aaKnown RBP4.24□□□□□ -1.73
ITGA3-208ENST00000506437 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
ITGA3-208ENST00000506437 SPRR2FQ96RM1 72 aa4.21□□□□□ -1.74
ITGA3-208ENST00000506437 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
ITGA3-208ENST00000506437 KRTAP12-3P60328 96 aa4.15□□□□□ -1.74
ITGA3-208ENST00000506437 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
ITGA3-208ENST00000506437 MT1EP04732 61 aa4.08□□□□□ -1.76
ITGA3-208ENST00000506437 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
ITGA3-208ENST00000506437 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
ITGA3-208ENST00000506437 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
ITGA3-208ENST00000506437 KRTAP5-9P26371 169 aa4□□□□□ -1.77
ITGA3-208ENST00000506437 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
ITGA3-208ENST00000506437 SPRR2EP22531 72 aa3.98□□□□□ -1.77
ITGA3-208ENST00000506437 SPRR2BP35325 72 aa3.98□□□□□ -1.77
ITGA3-208ENST00000506437 SPRR2AP35326 72 aa3.98□□□□□ -1.77
ITGA3-208ENST00000506437 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
ITGA3-208ENST00000506437 MT1LQ93083 61 aa3.98□□□□□ -1.77
ITGA3-208ENST00000506437 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
ITGA3-208ENST00000506437 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
ITGA3-208ENST00000506437 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
ITGA3-208ENST00000506437 KRTAP4-9Q9BYQ8 210 aa3.91□□□□□ -1.78
ITGA3-208ENST00000506437 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
ITGA3-208ENST00000506437 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
ITGA3-208ENST00000506437 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
ITGA3-208ENST00000506437 NEBP20929 6669 aa3.89□□□□□ -1.79
ITGA3-208ENST00000506437 MT1MQ8N339 61 aa3.86□□□□□ -1.79
ITGA3-208ENST00000506437 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
ITGA3-208ENST00000506437 MT1GP13640 62 aa3.83□□□□□ -1.8
ITGA3-208ENST00000506437 SPRR2DP22532 72 aa3.82□□□□□ -1.8
ITGA3-208ENST00000506437 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
ITGA3-208ENST00000506437 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
ITGA3-208ENST00000506437 SYNE1Q8NF91 8797 aaKnown RBP3.71□□□□□ -1.82
ITGA3-208ENST00000506437 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
ITGA3-208ENST00000506437 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
ITGA3-208ENST00000506437 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
ITGA3-208ENST00000506437 MT4P47944 62 aa3.45□□□□□ -1.86
ITGA3-208ENST00000506437 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
ITGA3-208ENST00000506437 PRM1P04553 51 aa3.43□□□□□ -1.86
ITGA3-208ENST00000506437 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
ITGA3-208ENST00000506437 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
ITGA3-208ENST00000506437 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
ITGA3-208ENST00000506437 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
ITGA3-208ENST00000506437 MT3P25713 68 aa3.36□□□□□ -1.87
ITGA3-208ENST00000506437 MT1AP04731 61 aa3.31□□□□□ -1.88
ITGA3-208ENST00000506437 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
ITGA3-208ENST00000506437 LCE1FQ5T754 118 aa3.28□□□□□ -1.89
ITGA3-208ENST00000506437 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
ITGA3-208ENST00000506437 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
ITGA3-208ENST00000506437 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.9
ITGA3-208ENST00000506437 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
ITGA3-208ENST00000506437 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
ITGA3-208ENST00000506437 KRTAP5-2Q701N4 177 aa2.95□□□□□ -1.94
ITGA3-208ENST00000506437 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
ITGA3-208ENST00000506437 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
ITGA3-208ENST00000506437 KRTAP5-10Q6L8G5 202 aa2.76□□□□□ -1.97
ITGA3-208ENST00000506437 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
ITGA3-208ENST00000506437 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
ITGA3-208ENST00000506437 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
ITGA3-208ENST00000506437 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
ITGA3-208ENST00000506437 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
ITGA3-208ENST00000506437 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
ITGA3-208ENST00000506437 KRTAP5-7Q6L8G8 165 aa2.49□□□□□ -2.01
ITGA3-208ENST00000506437 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
ITGA3-208ENST00000506437 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
ITGA3-208ENST00000506437 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
ITGA3-208ENST00000506437 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
ITGA3-208ENST00000506437 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
ITGA3-208ENST00000506437 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
ITGA3-208ENST00000506437 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
ITGA3-208ENST00000506437 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 52.1 ms