RNA–Protein interactions for RNA: ENST00000506275.1

ITGA1-204, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 7,461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-204ENST00000506275 LCE3AQ5TA76 89 aa1.11□□□□□ -2.23
ITGA1-204ENST00000506275 KRTAP12-3P60328 96 aa1.11□□□□□ -2.23
ITGA1-204ENST00000506275 SYNE1Q8NF91 8797 aaKnown RBP1.09□□□□□ -2.23
ITGA1-204ENST00000506275 APOBP04114 4563 aaKnown RBP1.08□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
ITGA1-204ENST00000506275 INE1O15225 51 aa1.07□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP10-7P60409 375 aaPredicted RBP1.06□□□□□ -2.24
ITGA1-204ENST00000506275 USH2AO75445 5202 aa1.05□□□□□ -2.24
ITGA1-204ENST00000506275 MT3P25713 68 aa1.04□□□□□ -2.24
ITGA1-204ENST00000506275 LCE3CQ5T5A8 94 aa1.04□□□□□ -2.24
ITGA1-204ENST00000506275 SPRR2FQ96RM1 72 aa1.04□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP4-1Q9BYQ7 146 aa1.03□□□□□ -2.24
ITGA1-204ENST00000506275 KRTAP9-7A8MTY7 169 aa1.03□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP5-8O75690 187 aa1.03□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
ITGA1-204ENST00000506275 FSIP2Q5CZC0 6907 aa1.01□□□□□ -2.25
ITGA1-204ENST00000506275 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
ITGA1-204ENST00000506275 MT1HP80294 61 aa0.99□□□□□ -2.25
ITGA1-204ENST00000506275 LPAP08519 4548 aa0.97□□□□□ -2.25
ITGA1-204ENST00000506275 MT2AP02795 61 aa0.97□□□□□ -2.25
ITGA1-204ENST00000506275 MT1FP04733 61 aa0.97□□□□□ -2.25
ITGA1-204ENST00000506275 KRTAP9-3Q9BYQ3 159 aa0.96□□□□□ -2.26
ITGA1-204ENST00000506275 KRTAP5-5Q701N2 237 aaPredicted RBP0.95□□□□□ -2.26
ITGA1-204ENST00000506275 MT1GP13640 62 aa0.95□□□□□ -2.26
ITGA1-204ENST00000506275 MUC19Q7Z5P9 8384 aa0.95□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2EP22531 72 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2BP35325 72 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2AP35326 72 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 LCE3EQ5T5B0 92 aa0.94□□□□□ -2.26
ITGA1-204ENST00000506275 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
ITGA1-204ENST00000506275 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
ITGA1-204ENST00000506275 KRTAP12-4P60329 112 aa0.93□□□□□ -2.26
ITGA1-204ENST00000506275 LCE5AQ5TCM9 118 aa0.93□□□□□ -2.26
ITGA1-204ENST00000506275 SPRR2GQ9BYE4 73 aa0.92□□□□□ -2.26
ITGA1-204ENST00000506275 KRTAP5-11Q6L8G4 156 aa0.9□□□□□ -2.27
ITGA1-204ENST00000506275 SPRR2DP22532 72 aa0.9□□□□□ -2.27
ITGA1-204ENST00000506275 NEBP20929 6669 aa0.89□□□□□ -2.27
ITGA1-204ENST00000506275 MT4P47944 62 aa0.89□□□□□ -2.27
ITGA1-204ENST00000506275 KRTAP5-1Q6L8H4 278 aa0.88□□□□□ -2.27
ITGA1-204ENST00000506275 SPRR5A0A1B0GTR4 108 aa0.88□□□□□ -2.27
ITGA1-204ENST00000506275 LCE3DQ9BYE3 92 aa0.88□□□□□ -2.27
ITGA1-204ENST00000506275 MT1XP80297 61 aa0.87□□□□□ -2.27
ITGA1-204ENST00000506275 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
ITGA1-204ENST00000506275 LCE1AQ5T7P2 110 aa0.86□□□□□ -2.27
ITGA1-204ENST00000506275 LCE1BQ5T7P3 118 aa0.86□□□□□ -2.27
ITGA1-204ENST00000506275 KRTAP4-3Q9BYR4 195 aa0.85□□□□□ -2.27
ITGA1-204ENST00000506275 LCE1FQ5T754 118 aa0.85□□□□□ -2.27
ITGA1-204ENST00000506275 MT1BP07438 61 aa0.84□□□□□ -2.27
ITGA1-204ENST00000506275 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.28
ITGA1-204ENST00000506275 PRM1P04553 51 aa0.82□□□□□ -2.28
ITGA1-204ENST00000506275 KRTAP2-2Q9BYT5 123 aa0.82□□□□□ -2.28
ITGA1-204ENST00000506275 KRTAP19-8Q3LI54 63 aa0.81□□□□□ -2.28
ITGA1-204ENST00000506275 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
ITGA1-204ENST00000506275 MT1LQ93083 61 aa0.78□□□□□ -2.28
ITGA1-204ENST00000506275 MT1EP04732 61 aa0.77□□□□□ -2.29
ITGA1-204ENST00000506275 MT1MQ8N339 61 aa0.76□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
ITGA1-204ENST00000506275 LCE1CQ5T751 118 aa0.75□□□□□ -2.29
ITGA1-204ENST00000506275 LCE1EQ5T753 118 aa0.75□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP6-3Q3LI67 103 aa0.74□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP2-3P0C7H8 128 aa0.73□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP2-4Q9BYR9 128 aa0.73□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP19-2Q3LHN2 52 aa0.72□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP2-1Q9BYU5 128 aa0.72□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP6-2Q3LI66 62 aa0.72□□□□□ -2.29
ITGA1-204ENST00000506275 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP6-1Q3LI64 71 aa0.7□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP9-6A8MVA2 160 aa0.69□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP5-7Q6L8G8 165 aa0.67□□□□□ -2.3
ITGA1-204ENST00000506275 MT1AP04731 61 aa0.67□□□□□ -2.3
ITGA1-204ENST00000506275 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
ITGA1-204ENST00000506275 PHGR1C9JFL3 82 aa0.43□□□□□ -2.34
ITGA1-204ENST00000506275 MUC16Q8WXI7 14507 aa0.4□□□□□ -2.35
ITGA1-204ENST00000506275 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
ITGA1-204ENST00000506275 KRTAP21-2Q3LI59 83 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 114.9 ms