RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 KRTAP5-10Q6L8G5 202 aa7.29□□□□□ -1.24
SQSTM1-210ENST00000506042 A0A1B0GU69 56 aa7.27□□□□□ -1.25
SQSTM1-210ENST00000506042 LCE3AQ5TA76 89 aa7.24□□□□□ -1.25
SQSTM1-210ENST00000506042 AHNAK2Q8IVF2 5795 aa7.2□□□□□ -1.26
SQSTM1-210ENST00000506042 KRTAP4-3Q9BYR4 195 aa7.19□□□□□ -1.26
SQSTM1-210ENST00000506042 KRTAP5-7Q6L8G8 165 aa7.12□□□□□ -1.27
SQSTM1-210ENST00000506042 COX7CP15954 63 aa7.1□□□□□ -1.27
SQSTM1-210ENST00000506042 A8MU10 97 aa7.09□□□□□ -1.27
SQSTM1-210ENST00000506042 KRTAP5-3Q6L8H2 238 aa7.07□□□□□ -1.28
SQSTM1-210ENST00000506042 KRTAP4-2Q9BYR5 136 aa7.07□□□□□ -1.28
SQSTM1-210ENST00000506042 PRR15LQ9BU68 103 aa7.06□□□□□ -1.28
SQSTM1-210ENST00000506042 KRTAP12-3P60328 96 aa7.04□□□□□ -1.28
SQSTM1-210ENST00000506042 H7BZZ5 65 aa7.03□□□□□ -1.28
SQSTM1-210ENST00000506042 KRTAP12-4P60329 112 aa7□□□□□ -1.29
SQSTM1-210ENST00000506042 SPRR5A0A1B0GTR4 108 aa6.99□□□□□ -1.29
SQSTM1-210ENST00000506042 KRTAP20-2Q3LI61 65 aa6.98□□□□□ -1.29
SQSTM1-210ENST00000506042 KRTAP5-5Q701N2 237 aaPredicted RBP6.84□□□□□ -1.31
SQSTM1-210ENST00000506042 KRTAP19-4Q3LI73 84 aa6.82□□□□□ -1.32
SQSTM1-210ENST00000506042 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
SQSTM1-210ENST00000506042 ATP5EP56381 51 aaPredicted RBP6.73□□□□□ -1.33
SQSTM1-210ENST00000506042 UQCR11O14957 56 aa6.72□□□□□ -1.33
SQSTM1-210ENST00000506042 ANAPC13Q9BS18 74 aa6.68□□□□□ -1.34
SQSTM1-210ENST00000506042 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
SQSTM1-210ENST00000506042 K7ERS5 55 aa6.66□□□□□ -1.34
SQSTM1-210ENST00000506042 KRTAP4-11Q9BYQ6 195 aa6.63□□□□□ -1.35
SQSTM1-210ENST00000506042 MIR22HGQ0VDD5 57 aa6.47□□□□□ -1.37
SQSTM1-210ENST00000506042 KRTAP23-1A1A580 65 aa6.46□□□□□ -1.38
SQSTM1-210ENST00000506042 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
SQSTM1-210ENST00000506042 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
SQSTM1-210ENST00000506042 SYNE1Q8NF91 8797 aaKnown RBP6.41□□□□□ -1.38
SQSTM1-210ENST00000506042 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
SQSTM1-210ENST00000506042 MT1AP04731 61 aa6.35□□□□□ -1.39
SQSTM1-210ENST00000506042 KRTAP5-2Q701N4 177 aa6.35□□□□□ -1.39
SQSTM1-210ENST00000506042 TMEM258P61165 79 aa6.31□□□□□ -1.4
SQSTM1-210ENST00000506042 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
SQSTM1-210ENST00000506042 KRTAP5-8O75690 187 aa6.21□□□□□ -1.42
SQSTM1-210ENST00000506042 V9GYY9 64 aa6.2□□□□□ -1.42
SQSTM1-210ENST00000506042 RPS28P62857 69 aaKnown RBP6.16□□□□□ -1.42
SQSTM1-210ENST00000506042 CDC42SE1Q9NRR8 79 aa6.12□□□□□ -1.43
SQSTM1-210ENST00000506042 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
SQSTM1-210ENST00000506042 MUC5ACP98088 5654 aa6.08□□□□□ -1.44
SQSTM1-210ENST00000506042 AHNAKQ09666 5890 aaKnown RBP6.06□□□□□ -1.44
SQSTM1-210ENST00000506042 PSPHP1O15172 72 aa6.05□□□□□ -1.44
SQSTM1-210ENST00000506042 Q1T7F1 81 aa6□□□□□ -1.45
SQSTM1-210ENST00000506042 A6NED7 52 aa5.94□□□□□ -1.46
SQSTM1-210ENST00000506042 MUC5BQ9HC84 5762 aaPredicted RBP5.94□□□□□ -1.46
SQSTM1-210ENST00000506042 ROMO1P60602 79 aa5.92□□□□□ -1.46
SQSTM1-210ENST00000506042 MT3P25713 68 aa5.91□□□□□ -1.46
SQSTM1-210ENST00000506042 OBSCNQ5VST9 7968 aa5.9□□□□□ -1.46
SQSTM1-210ENST00000506042 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
SQSTM1-210ENST00000506042 KRTAP5-1Q6L8H4 278 aa5.74□□□□□ -1.49
SQSTM1-210ENST00000506042 SVIPQ8NHG7 77 aa5.54□□□□□ -1.52
SQSTM1-210ENST00000506042 PCP4P48539 62 aa5.5□□□□□ -1.53
SQSTM1-210ENST00000506042 LCE1EQ5T753 118 aa5.5□□□□□ -1.53
SQSTM1-210ENST00000506042 LCE1BQ5T7P3 118 aa5.18□□□□□ -1.58
SQSTM1-210ENST00000506042 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
SQSTM1-210ENST00000506042 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.97□□□□□ -1.61
SQSTM1-210ENST00000506042 LCE1FQ5T754 118 aa4.67□□□□□ -1.66
SQSTM1-210ENST00000506042 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
SQSTM1-210ENST00000506042 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
SQSTM1-210ENST00000506042 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
SQSTM1-210ENST00000506042 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
SQSTM1-210ENST00000506042 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
SQSTM1-210ENST00000506042 H3BS24 57 aa4.36□□□□□ -1.71
SQSTM1-210ENST00000506042 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
SQSTM1-210ENST00000506042 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
SQSTM1-210ENST00000506042 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
SQSTM1-210ENST00000506042 KRTAP4-4Q9BYR3 166 aa4.15□□□□□ -1.75
SQSTM1-210ENST00000506042 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
SQSTM1-210ENST00000506042 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
SQSTM1-210ENST00000506042 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
SQSTM1-210ENST00000506042 LUZP6Q538Z0 58 aa3.88□□□□□ -1.79
SQSTM1-210ENST00000506042 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
SQSTM1-210ENST00000506042 KRTAP21-1Q3LI58 79 aa3.36□□□□□ -1.87
SQSTM1-210ENST00000506042 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
SQSTM1-210ENST00000506042 PRM1P04553 51 aa2.93□□□□□ -1.94
SQSTM1-210ENST00000506042 INE1O15225 51 aa2.61□□□□□ -1.99
SQSTM1-210ENST00000506042 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 70.5 ms