RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
CCND3-209ENST00000505884 UQCR11O14957 56 aa6.47□□□□□ -1.37
CCND3-209ENST00000505884 RPS28P62857 69 aaKnown RBP6.47□□□□□ -1.37
CCND3-209ENST00000505884 MT1LQ93083 61 aa6.47□□□□□ -1.37
CCND3-209ENST00000505884 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
CCND3-209ENST00000505884 TNP1P09430 55 aa6.42□□□□□ -1.38
CCND3-209ENST00000505884 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
CCND3-209ENST00000505884 MT4P47944 62 aa6.39□□□□□ -1.39
CCND3-209ENST00000505884 PSPHP1O15172 72 aa6.37□□□□□ -1.39
CCND3-209ENST00000505884 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
CCND3-209ENST00000505884 LCE4AQ5TA78 99 aa6.3□□□□□ -1.4
CCND3-209ENST00000505884 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
CCND3-209ENST00000505884 HMCN1Q96RW7 5635 aa6.25□□□□□ -1.41
CCND3-209ENST00000505884 A6NED7 52 aa6.2□□□□□ -1.42
CCND3-209ENST00000505884 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
CCND3-209ENST00000505884 KRTAP5-4Q6L8H1 288 aa6.17□□□□□ -1.42
CCND3-209ENST00000505884 KRTAP4-6Q9BYQ5 205 aa6.17□□□□□ -1.42
CCND3-209ENST00000505884 K7ERS5 55 aa6.15□□□□□ -1.42
CCND3-209ENST00000505884 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
CCND3-209ENST00000505884 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
CCND3-209ENST00000505884 KRTAP5-10Q6L8G5 202 aa5.97□□□□□ -1.45
CCND3-209ENST00000505884 KRTAP25-1Q3LHN0 102 aa5.96□□□□□ -1.46
CCND3-209ENST00000505884 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
CCND3-209ENST00000505884 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
CCND3-209ENST00000505884 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
CCND3-209ENST00000505884 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
CCND3-209ENST00000505884 ROMO1P60602 79 aa5.81□□□□□ -1.48
CCND3-209ENST00000505884 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
CCND3-209ENST00000505884 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
CCND3-209ENST00000505884 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
CCND3-209ENST00000505884 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
CCND3-209ENST00000505884 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
CCND3-209ENST00000505884 LCE3CQ5T5A8 94 aa5.69□□□□□ -1.5
CCND3-209ENST00000505884 BRK1Q8WUW1 75 aa5.69□□□□□ -1.5
CCND3-209ENST00000505884 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
CCND3-209ENST00000505884 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
CCND3-209ENST00000505884 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
CCND3-209ENST00000505884 MT1AP04731 61 aa5.48□□□□□ -1.53
CCND3-209ENST00000505884 KRTAP9-6A8MVA2 160 aa5.42□□□□□ -1.54
CCND3-209ENST00000505884 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
CCND3-209ENST00000505884 KRTAP5-2Q701N4 177 aa5.38□□□□□ -1.55
CCND3-209ENST00000505884 PMAIP1Q13794 54 aa5.36□□□□□ -1.55
CCND3-209ENST00000505884 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
CCND3-209ENST00000505884 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
CCND3-209ENST00000505884 PRO0628Q9UI54 55 aa5.29□□□□□ -1.56
CCND3-209ENST00000505884 KRTAP5-8O75690 187 aa5.21□□□□□ -1.58
CCND3-209ENST00000505884 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
CCND3-209ENST00000505884 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CCND3-209ENST00000505884 MT3P25713 68 aa5.01□□□□□ -1.61
CCND3-209ENST00000505884 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
CCND3-209ENST00000505884 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
CCND3-209ENST00000505884 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
CCND3-209ENST00000505884 MUC5BQ9HC84 5762 aaPredicted RBP4.96□□□□□ -1.62
CCND3-209ENST00000505884 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
CCND3-209ENST00000505884 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
CCND3-209ENST00000505884 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
CCND3-209ENST00000505884 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
CCND3-209ENST00000505884 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
CCND3-209ENST00000505884 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
CCND3-209ENST00000505884 LCE1CQ5T751 118 aa4.26□□□□□ -1.73
CCND3-209ENST00000505884 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
CCND3-209ENST00000505884 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
CCND3-209ENST00000505884 H3BS24 57 aa4.09□□□□□ -1.75
CCND3-209ENST00000505884 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
CCND3-209ENST00000505884 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
CCND3-209ENST00000505884 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
CCND3-209ENST00000505884 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CCND3-209ENST00000505884 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
CCND3-209ENST00000505884 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
CCND3-209ENST00000505884 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
CCND3-209ENST00000505884 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
CCND3-209ENST00000505884 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
CCND3-209ENST00000505884 A0A0A0MQY5 61 aa3.12□□□□□ -1.91
CCND3-209ENST00000505884 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
CCND3-209ENST00000505884 INE1O15225 51 aa3.1□□□□□ -1.91
CCND3-209ENST00000505884 PRM1P04553 51 aa2.97□□□□□ -1.93
CCND3-209ENST00000505884 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
CCND3-209ENST00000505884 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms