RNA–Protein interactions for RNA: ENST00000505507.6

PDE4D-213, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-213ENST00000505507 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
PDE4D-213ENST00000505507 CRCT1Q9UGL9 99 aa1.61□□□□□ -2.15
PDE4D-213ENST00000505507 LINC01554Q52M75 96 aa1.6□□□□□ -2.15
PDE4D-213ENST00000505507 KRTAP5-5Q701N2 237 aaPredicted RBP1.6□□□□□ -2.15
PDE4D-213ENST00000505507 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
PDE4D-213ENST00000505507 KRTAP19-8Q3LI54 63 aa1.58□□□□□ -2.16
PDE4D-213ENST00000505507 PRO2289Q9P1D8 64 aa1.58□□□□□ -2.16
PDE4D-213ENST00000505507 LINC01558Q9Y6Z2 57 aa1.58□□□□□ -2.16
PDE4D-213ENST00000505507 A6NN06 94 aa1.57□□□□□ -2.16
PDE4D-213ENST00000505507 UQCR11O14957 56 aa1.56□□□□□ -2.16
PDE4D-213ENST00000505507 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
PDE4D-213ENST00000505507 A0A0D9SG42 100 aa1.55□□□□□ -2.16
PDE4D-213ENST00000505507 Q1T7F1 81 aa1.55□□□□□ -2.16
PDE4D-213ENST00000505507 KRTAP19-6Q3LI70 58 aa1.55□□□□□ -2.16
PDE4D-213ENST00000505507 MT1BP07438 61 aa1.54□□□□□ -2.16
PDE4D-213ENST00000505507 SPATA8Q6RVD6 105 aa1.54□□□□□ -2.16
PDE4D-213ENST00000505507 MIR22HGQ0VDD5 57 aa1.52□□□□□ -2.17
PDE4D-213ENST00000505507 KRTAP13-4Q3LI77 160 aa1.52□□□□□ -2.17
PDE4D-213ENST00000505507 KRTAP12-1P59990 96 aa1.49□□□□□ -2.17
PDE4D-213ENST00000505507 KTN1-AS1Q86SY8 53 aa1.49□□□□□ -2.17
PDE4D-213ENST00000505507 MT1XP80297 61 aa1.48□□□□□ -2.17
PDE4D-213ENST00000505507 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
PDE4D-213ENST00000505507 LCE1BQ5T7P3 118 aa1.48□□□□□ -2.17
PDE4D-213ENST00000505507 TNP1P09430 55 aa1.45□□□□□ -2.18
PDE4D-213ENST00000505507 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
PDE4D-213ENST00000505507 CDC42SE1Q9NRR8 79 aa1.45□□□□□ -2.18
PDE4D-213ENST00000505507 USH2AO75445 5202 aa1.45□□□□□ -2.18
PDE4D-213ENST00000505507 FSIP2Q5CZC0 6907 aa1.44□□□□□ -2.18
PDE4D-213ENST00000505507 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
PDE4D-213ENST00000505507 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
PDE4D-213ENST00000505507 ROMO1P60602 79 aa1.4□□□□□ -2.19
PDE4D-213ENST00000505507 BRK1Q8WUW1 75 aa1.4□□□□□ -2.19
PDE4D-213ENST00000505507 C10orf95Q9H7T3 257 aa1.4□□□□□ -2.19
PDE4D-213ENST00000505507 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
PDE4D-213ENST00000505507 SPRR2FQ96RM1 72 aa1.39□□□□□ -2.19
PDE4D-213ENST00000505507 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
PDE4D-213ENST00000505507 SPRR2EP22531 72 aa1.34□□□□□ -2.19
PDE4D-213ENST00000505507 SPRR2BP35325 72 aa1.34□□□□□ -2.19
PDE4D-213ENST00000505507 SPRR2AP35326 72 aa1.34□□□□□ -2.19
PDE4D-213ENST00000505507 KRTAP19-5Q3LI72 72 aa1.33□□□□□ -2.2
PDE4D-213ENST00000505507 MACF1Q9UPN3 7388 aaKnown RBP1.33□□□□□ -2.2
PDE4D-213ENST00000505507 MT1EP04732 61 aa1.31□□□□□ -2.2
PDE4D-213ENST00000505507 SPRR2DP22532 72 aa1.31□□□□□ -2.2
PDE4D-213ENST00000505507 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
PDE4D-213ENST00000505507 MT1GP13640 62 aa1.3□□□□□ -2.2
PDE4D-213ENST00000505507 KRTAP19-3Q7Z4W3 81 aa1.3□□□□□ -2.2
PDE4D-213ENST00000505507 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
PDE4D-213ENST00000505507 KRTAP20-1Q3LI63 56 aa1.29□□□□□ -2.2
PDE4D-213ENST00000505507 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
PDE4D-213ENST00000505507 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.21
PDE4D-213ENST00000505507 MUC19Q7Z5P9 8384 aa1.27□□□□□ -2.21
PDE4D-213ENST00000505507 MT1LQ93083 61 aa1.27□□□□□ -2.21
PDE4D-213ENST00000505507 KMT2DO14686 5537 aa1.26□□□□□ -2.21
PDE4D-213ENST00000505507 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
PDE4D-213ENST00000505507 KRTAP2-1Q9BYU5 128 aa1.25□□□□□ -2.21
PDE4D-213ENST00000505507 MT1MQ8N339 61 aa1.24□□□□□ -2.21
PDE4D-213ENST00000505507 NEBP20929 6669 aa1.21□□□□□ -2.22
PDE4D-213ENST00000505507 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
PDE4D-213ENST00000505507 MUC12Q9UKN1 5478 aa1.19□□□□□ -2.22
PDE4D-213ENST00000505507 INE1O15225 51 aa1.15□□□□□ -2.23
PDE4D-213ENST00000505507 MT4P47944 62 aa1.12□□□□□ -2.23
PDE4D-213ENST00000505507 DSTQ03001 7570 aaKnown RBP1.11□□□□□ -2.23
PDE4D-213ENST00000505507 MT1AP04731 61 aa1.09□□□□□ -2.23
PDE4D-213ENST00000505507 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
PDE4D-213ENST00000505507 GPR98Q8WXG9 6306 aa1.06□□□□□ -2.24
PDE4D-213ENST00000505507 KRTAP20-2Q3LI61 65 aa1.06□□□□□ -2.24
PDE4D-213ENST00000505507 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
PDE4D-213ENST00000505507 KRTAP6-2Q3LI66 62 aa1.01□□□□□ -2.25
PDE4D-213ENST00000505507 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
PDE4D-213ENST00000505507 KRTAP5-10Q6L8G5 202 aa0.97□□□□□ -2.25
PDE4D-213ENST00000505507 AHNAK2Q8IVF2 5795 aa0.9□□□□□ -2.26
PDE4D-213ENST00000505507 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
PDE4D-213ENST00000505507 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
PDE4D-213ENST00000505507 MUC5ACP98088 5654 aa0.75□□□□□ -2.29
PDE4D-213ENST00000505507 PRM1P04553 51 aa0.7□□□□□ -2.3
PDE4D-213ENST00000505507 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
PDE4D-213ENST00000505507 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
PDE4D-213ENST00000505507 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 74.2 ms