RNA–Protein interactions for RNA: ENST00000505225.1

RERE-216, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-216ENST00000505225 LINC01554Q52M75 96 aa2.59□□□□□ -1.99
RERE-216ENST00000505225 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
RERE-216ENST00000505225 SPTSSBQ8NFR3 76 aa2.58□□□□□ -2
RERE-216ENST00000505225 PRO0628Q9UI54 55 aa2.58□□□□□ -2
RERE-216ENST00000505225 COA5Q86WW8 74 aa2.57□□□□□ -2
RERE-216ENST00000505225 SERP1Q9Y6X1 66 aa2.57□□□□□ -2
RERE-216ENST00000505225 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
RERE-216ENST00000505225 MT4P47944 62 aa2.56□□□□□ -2
RERE-216ENST00000505225 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
RERE-216ENST00000505225 RPS28P62857 69 aaKnown RBP2.55□□□□□ -2
RERE-216ENST00000505225 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
RERE-216ENST00000505225 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
RERE-216ENST00000505225 KRTAP4-7Q9BYR0 210 aa2.52□□□□□ -2.01
RERE-216ENST00000505225 MT1GP13640 62 aa2.51□□□□□ -2.01
RERE-216ENST00000505225 MT1MQ8N339 61 aa2.5□□□□□ -2.01
RERE-216ENST00000505225 LINC01558Q9Y6Z2 57 aa2.48□□□□□ -2.01
RERE-216ENST00000505225 Q1T7F1 81 aa2.47□□□□□ -2.01
RERE-216ENST00000505225 KRTAP19-5Q3LI72 72 aa2.46□□□□□ -2.02
RERE-216ENST00000505225 PP632Q6XCG6 107 aa2.46□□□□□ -2.02
RERE-216ENST00000505225 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
RERE-216ENST00000505225 MT1LQ93083 61 aa2.45□□□□□ -2.02
RERE-216ENST00000505225 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
RERE-216ENST00000505225 A0A1B0GU69 56 aa2.44□□□□□ -2.02
RERE-216ENST00000505225 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
RERE-216ENST00000505225 KRTAP4-3Q9BYR4 195 aa2.44□□□□□ -2.02
RERE-216ENST00000505225 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
RERE-216ENST00000505225 A0A1B0GU33 70 aa2.4□□□□□ -2.03
RERE-216ENST00000505225 A0A0D9SG42 100 aa2.39□□□□□ -2.03
RERE-216ENST00000505225 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
RERE-216ENST00000505225 UQCR11O14957 56 aa2.38□□□□□ -2.03
RERE-216ENST00000505225 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
RERE-216ENST00000505225 KRTAP5-5Q701N2 237 aaPredicted RBP2.37□□□□□ -2.03
RERE-216ENST00000505225 K7ERS5 55 aa2.36□□□□□ -2.03
RERE-216ENST00000505225 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
RERE-216ENST00000505225 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
RERE-216ENST00000505225 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
RERE-216ENST00000505225 AHNAKQ09666 5890 aaKnown RBP2.31□□□□□ -2.04
RERE-216ENST00000505225 A6NED7 52 aa2.31□□□□□ -2.04
RERE-216ENST00000505225 A8MU10 97 aa2.31□□□□□ -2.04
RERE-216ENST00000505225 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
RERE-216ENST00000505225 PMAIP1Q13794 54 aa2.3□□□□□ -2.04
RERE-216ENST00000505225 LCE3AQ5TA76 89 aa2.29□□□□□ -2.04
RERE-216ENST00000505225 CDC42SE1Q9NRR8 79 aa2.29□□□□□ -2.04
RERE-216ENST00000505225 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
RERE-216ENST00000505225 KRTAP12-1P59990 96 aa2.27□□□□□ -2.05
RERE-216ENST00000505225 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
RERE-216ENST00000505225 KRTAP12-4P60329 112 aa2.24□□□□□ -2.05
RERE-216ENST00000505225 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
RERE-216ENST00000505225 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
RERE-216ENST00000505225 BRK1Q8WUW1 75 aa2.22□□□□□ -2.05
RERE-216ENST00000505225 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
RERE-216ENST00000505225 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
RERE-216ENST00000505225 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
RERE-216ENST00000505225 TNP1P09430 55 aa2.15□□□□□ -2.07
RERE-216ENST00000505225 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
RERE-216ENST00000505225 OBSCNQ5VST9 7968 aa2.15□□□□□ -2.07
RERE-216ENST00000505225 ROMO1P60602 79 aa2.13□□□□□ -2.07
RERE-216ENST00000505225 MT1AP04731 61 aa2.08□□□□□ -2.08
RERE-216ENST00000505225 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
RERE-216ENST00000505225 KTN1-AS1Q86SY8 53 aa2.03□□□□□ -2.08
RERE-216ENST00000505225 KRTAP6-2Q3LI66 62 aa2.02□□□□□ -2.09
RERE-216ENST00000505225 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
RERE-216ENST00000505225 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
RERE-216ENST00000505225 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
RERE-216ENST00000505225 LCE1EQ5T753 118 aa1.94□□□□□ -2.1
RERE-216ENST00000505225 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
RERE-216ENST00000505225 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
RERE-216ENST00000505225 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
RERE-216ENST00000505225 LCE1BQ5T7P3 118 aa1.69□□□□□ -2.14
RERE-216ENST00000505225 INE1O15225 51 aa1.6□□□□□ -2.15
RERE-216ENST00000505225 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
RERE-216ENST00000505225 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
RERE-216ENST00000505225 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
RERE-216ENST00000505225 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
RERE-216ENST00000505225 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
RERE-216ENST00000505225 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
RERE-216ENST00000505225 PRM1P04553 51 aa1.08□□□□□ -2.24
RERE-216ENST00000505225 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms