RNA–Protein interactions for RNA: ENST00000505187.5

SPOCK3-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2

Gene SPOCK3, Length 1,588 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-208	ENST00000505187	KRTAP6-3	Q3LI67	103 aa		7.76	□□□□□ -1.17
SPOCK3-208	ENST00000505187	MT1E	P04732	61 aa		7.74	□□□□□ -1.17
SPOCK3-208	ENST00000505187	SPRR2F	Q96RM1	72 aa		7.74	□□□□□ -1.17
SPOCK3-208	ENST00000505187	KRTAP4-12	Q9BQ66	201 aa		7.73	□□□□□ -1.17
SPOCK3-208	ENST00000505187	SYNE2	Q8WXH0	6885 aa	Known RBP	7.71	□□□□□ -1.18
SPOCK3-208	ENST00000505187	KRTAP15-1	Q3LI76	137 aa		7.65	□□□□□ -1.18
SPOCK3-208	ENST00000505187	MT1L	Q93083	61 aa		7.55	□□□□□ -1.2
SPOCK3-208	ENST00000505187	KRTAP19-4	Q3LI73	84 aa		7.53	□□□□□ -1.2
SPOCK3-208	ENST00000505187	LCE1D	Q5T752	114 aa		7.5	□□□□□ -1.21
SPOCK3-208	ENST00000505187	KRTAP19-3	Q7Z4W3	81 aa		7.5	□□□□□ -1.21
SPOCK3-208	ENST00000505187	MUC12	Q9UKN1	5478 aa		7.46	□□□□□ -1.21
SPOCK3-208	ENST00000505187	LCE1A	Q5T7P2	110 aa		7.45	□□□□□ -1.22
SPOCK3-208	ENST00000505187	KRTAP4-2	Q9BYR5	136 aa		7.45	□□□□□ -1.22
SPOCK3-208	ENST00000505187	MT1G	P13640	62 aa		7.44	□□□□□ -1.22
SPOCK3-208	ENST00000505187	SPRR2E	P22531	72 aa		7.41	□□□□□ -1.22
SPOCK3-208	ENST00000505187	SPRR2B	P35325	72 aa		7.41	□□□□□ -1.22
SPOCK3-208	ENST00000505187	SPRR2A	P35326	72 aa		7.41	□□□□□ -1.22
SPOCK3-208	ENST00000505187	LCE5A	Q5TCM9	118 aa		7.4	□□□□□ -1.22
SPOCK3-208	ENST00000505187	KRTAP4-9	Q9BYQ8	210 aa		7.4	□□□□□ -1.22
SPOCK3-208	ENST00000505187	KRTAP5-3	Q6L8H2	238 aa		7.34	□□□□□ -1.23
SPOCK3-208	ENST00000505187	LCE3C	Q5T5A8	94 aa		7.32	□□□□□ -1.24
SPOCK3-208	ENST00000505187	MT1M	Q8N339	61 aa		7.31	□□□□□ -1.24
SPOCK3-208	ENST00000505187	MDN1	Q9NU22	5596 aa		7.26	□□□□□ -1.25
SPOCK3-208	ENST00000505187	NEB	P20929	6669 aa		7.25	□□□□□ -1.25
SPOCK3-208	ENST00000505187	SPRR2D	P22532	72 aa		7.16	□□□□□ -1.26
SPOCK3-208	ENST00000505187	SPRR5	A0A1B0GTR4	108 aa		7.12	□□□□□ -1.27
SPOCK3-208	ENST00000505187	KRTAP4-3	Q9BYR4	195 aa		7.07	□□□□□ -1.28
SPOCK3-208	ENST00000505187	KRTAP4-11	Q9BYQ6	195 aa		6.97	□□□□□ -1.29
SPOCK3-208	ENST00000505187	KRTAP9-6	A8MVA2	160 aa		6.87	□□□□□ -1.31
SPOCK3-208	ENST00000505187	KRTAP20-1	Q3LI63	56 aa		6.86	□□□□□ -1.31
SPOCK3-208	ENST00000505187	KRTAP2-3	P0C7H8	128 aa		6.82	□□□□□ -1.32
SPOCK3-208	ENST00000505187	KRTAP2-4	Q9BYR9	128 aa		6.82	□□□□□ -1.32
SPOCK3-208	ENST00000505187	DST	Q03001	7570 aa	Known RBP	6.8	□□□□□ -1.32
SPOCK3-208	ENST00000505187	LUZP6	Q538Z0	58 aa		6.74	□□□□□ -1.33
SPOCK3-208	ENST00000505187	KRTAP2-2	Q9BYT5	123 aa		6.66	□□□□□ -1.34
SPOCK3-208	ENST00000505187	KRTAP2-1	Q9BYU5	128 aa		6.66	□□□□□ -1.34
SPOCK3-208	ENST00000505187	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.62	□□□□□ -1.35
SPOCK3-208	ENST00000505187	KRTAP5-4	Q6L8H1	288 aa		6.46	□□□□□ -1.38
SPOCK3-208	ENST00000505187	MT1A	P04731	61 aa		6.45	□□□□□ -1.38
SPOCK3-208	ENST00000505187	LCE4A	Q5TA78	99 aa		6.41	□□□□□ -1.38
SPOCK3-208	ENST00000505187	NDUFAF8	A1L188	74 aa		6.34	□□□□□ -1.39
SPOCK3-208	ENST00000505187	KRTAP6-1	Q3LI64	71 aa		6.34	□□□□□ -1.39
SPOCK3-208	ENST00000505187	KRTAP12-4	P60329	112 aa		6.23	□□□□□ -1.41
SPOCK3-208	ENST00000505187	SYNE1	Q8NF91	8797 aa	Known RBP	6.19	□□□□□ -1.42
SPOCK3-208	ENST00000505187	MT4	P47944	62 aa		6.16	□□□□□ -1.42
SPOCK3-208	ENST00000505187	KRTAP20-2	Q3LI61	65 aa		6.01	□□□□□ -1.45
SPOCK3-208	ENST00000505187	HMCN1	Q96RW7	5635 aa		5.96	□□□□□ -1.46
SPOCK3-208	ENST00000505187	KRTAP6-2	Q3LI66	62 aa		5.87	□□□□□ -1.47
SPOCK3-208	ENST00000505187	MT3	P25713	68 aa		5.86	□□□□□ -1.47
SPOCK3-208	ENST00000505187	KRTAP5-2	Q701N4	177 aa		5.82	□□□□□ -1.48
SPOCK3-208	ENST00000505187	GPR98	Q8WXG9	6306 aa		5.59	□□□□□ -1.51
SPOCK3-208	ENST00000505187		A0A0A0MQY5	61 aa		5.57	□□□□□ -1.52
SPOCK3-208	ENST00000505187	AHNAK2	Q8IVF2	5795 aa		5.54	□□□□□ -1.52
SPOCK3-208	ENST00000505187	LCE3D	Q9BYE3	92 aa		5.46	□□□□□ -1.54
SPOCK3-208	ENST00000505187	KRTAP5-10	Q6L8G5	202 aa		5.38	□□□□□ -1.55
SPOCK3-208	ENST00000505187	INE1	O15225	51 aa		5.31	□□□□□ -1.56
SPOCK3-208	ENST00000505187	OBSCN	Q5VST9	7968 aa		5.31	□□□□□ -1.56
SPOCK3-208	ENST00000505187	LCE3E	Q5T5B0	92 aa		5.29	□□□□□ -1.56
SPOCK3-208	ENST00000505187	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.29	□□□□□ -1.56
SPOCK3-208	ENST00000505187		H3BS24	57 aa		5.23	□□□□□ -1.57
SPOCK3-208	ENST00000505187	LCE1E	Q5T753	118 aa		5.17	□□□□□ -1.58
SPOCK3-208	ENST00000505187	KRTAP5-7	Q6L8G8	165 aa		5.1	□□□□□ -1.59
SPOCK3-208	ENST00000505187	KRTAP5-8	O75690	187 aa		5.08	□□□□□ -1.6
SPOCK3-208	ENST00000505187	KRTAP5-1	Q6L8H4	278 aa		5.04	□□□□□ -1.6
SPOCK3-208	ENST00000505187	MUC5AC	P98088	5654 aa		4.81	□□□□□ -1.64
SPOCK3-208	ENST00000505187	LCE1C	Q5T751	118 aa		4.8	□□□□□ -1.64
SPOCK3-208	ENST00000505187	LCE1B	Q5T7P3	118 aa		4.8	□□□□□ -1.64
SPOCK3-208	ENST00000505187	KRTAP5-11	Q6L8G4	156 aa		4.65	□□□□□ -1.66
SPOCK3-208	ENST00000505187	PRM1	P04553	51 aa		4.46	□□□□□ -1.7
SPOCK3-208	ENST00000505187	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.46	□□□□□ -1.7
SPOCK3-208	ENST00000505187	AHNAK	Q09666	5890 aa	Known RBP	4.42	□□□□□ -1.7
SPOCK3-208	ENST00000505187	KRTAP4-4	Q9BYR3	166 aa		4.37	□□□□□ -1.71
SPOCK3-208	ENST00000505187	KRTAP21-2	Q3LI59	83 aa		4.18	□□□□□ -1.74
SPOCK3-208	ENST00000505187	LCE1F	Q5T754	118 aa		3.94	□□□□□ -1.78
SPOCK3-208	ENST00000505187	PHGR1	C9JFL3	82 aa		3.64	□□□□□ -1.83
SPOCK3-208	ENST00000505187	MUC19	Q7Z5P9	8384 aa		3.14	□□□□□ -1.91
SPOCK3-208	ENST00000505187	KRTAP21-1	Q3LI58	79 aa		2.71	□□□□□ -1.98
SPOCK3-208	ENST00000505187	MUC16	Q8WXI7	14507 aa		2.31	□□□□□ -2.04

Retrieved 78 of 20,778 RNA–protein pairs in 64.1 ms