RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
SSBP2-204ENST00000504985 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
SSBP2-204ENST00000504985 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
SSBP2-204ENST00000504985 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
SSBP2-204ENST00000504985 LPAP08519 4548 aa3.25□□□□□ -1.89
SSBP2-204ENST00000504985 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.9
SSBP2-204ENST00000504985 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
SSBP2-204ENST00000504985 KRTAP4-1Q9BYQ7 146 aa3.19□□□□□ -1.9
SSBP2-204ENST00000504985 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
SSBP2-204ENST00000504985 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
SSBP2-204ENST00000504985 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
SSBP2-204ENST00000504985 KRTAP19-2Q3LHN2 52 aa3.12□□□□□ -1.91
SSBP2-204ENST00000504985 FLGP20930 4061 aaPredicted RBP2.97□□□□□ -1.93
SSBP2-204ENST00000504985 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
SSBP2-204ENST00000504985 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
SSBP2-204ENST00000504985 TNP1P09430 55 aa2.96□□□□□ -1.94
SSBP2-204ENST00000504985 MT1HP80294 61 aa2.96□□□□□ -1.94
SSBP2-204ENST00000504985 M0R2T5 61 aa2.87□□□□□ -1.95
SSBP2-204ENST00000504985 MT2AP02795 61 aa2.85□□□□□ -1.95
SSBP2-204ENST00000504985 SSPOA2VEC9 5147 aa2.84□□□□□ -1.96
SSBP2-204ENST00000504985 USH2AO75445 5202 aa2.84□□□□□ -1.96
SSBP2-204ENST00000504985 FCGBPQ9Y6R7 5405 aaPredicted RBP2.83□□□□□ -1.96
SSBP2-204ENST00000504985 MT1FP04733 61 aa2.83□□□□□ -1.96
SSBP2-204ENST00000504985 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
SSBP2-204ENST00000504985 KRTAP10-10P60014 251 aa2.78□□□□□ -1.96
SSBP2-204ENST00000504985 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
SSBP2-204ENST00000504985 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
SSBP2-204ENST00000504985 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
SSBP2-204ENST00000504985 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
SSBP2-204ENST00000504985 MT1BP07438 61 aa2.68□□□□□ -1.98
SSBP2-204ENST00000504985 KRTAP20-1Q3LI63 56 aa2.68□□□□□ -1.98
SSBP2-204ENST00000504985 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
SSBP2-204ENST00000504985 NEBP20929 6669 aa2.63□□□□□ -1.99
SSBP2-204ENST00000504985 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
SSBP2-204ENST00000504985 LCE3DQ9BYE3 92 aa2.61□□□□□ -1.99
SSBP2-204ENST00000504985 MT1XP80297 61 aa2.59□□□□□ -2
SSBP2-204ENST00000504985 KRTAP8-1Q8IUC2 63 aa2.59□□□□□ -2
SSBP2-204ENST00000504985 KRTAP19-6Q3LI70 58 aa2.55□□□□□ -2
SSBP2-204ENST00000504985 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
SSBP2-204ENST00000504985 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SSBP2-204ENST00000504985 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
SSBP2-204ENST00000504985 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
SSBP2-204ENST00000504985 KMT2DO14686 5537 aa2.48□□□□□ -2.01
SSBP2-204ENST00000504985 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SSBP2-204ENST00000504985 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
SSBP2-204ENST00000504985 KRTAP2-1Q9BYU5 128 aa2.44□□□□□ -2.02
SSBP2-204ENST00000504985 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
SSBP2-204ENST00000504985 SPRR2EP22531 72 aa2.33□□□□□ -2.04
SSBP2-204ENST00000504985 SPRR2BP35325 72 aa2.33□□□□□ -2.04
SSBP2-204ENST00000504985 SPRR2AP35326 72 aa2.33□□□□□ -2.04
SSBP2-204ENST00000504985 KRTAP19-5Q3LI72 72 aa2.32□□□□□ -2.04
SSBP2-204ENST00000504985 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
SSBP2-204ENST00000504985 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
SSBP2-204ENST00000504985 MT1EP04732 61 aa2.26□□□□□ -2.05
SSBP2-204ENST00000504985 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
SSBP2-204ENST00000504985 SPRR2DP22532 72 aa2.25□□□□□ -2.05
SSBP2-204ENST00000504985 MT1LQ93083 61 aa2.22□□□□□ -2.05
SSBP2-204ENST00000504985 DSTQ03001 7570 aaKnown RBP2.19□□□□□ -2.06
SSBP2-204ENST00000504985 KRTAP19-3Q7Z4W3 81 aa2.16□□□□□ -2.06
SSBP2-204ENST00000504985 HMCN1Q96RW7 5635 aa2.14□□□□□ -2.07
SSBP2-204ENST00000504985 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SSBP2-204ENST00000504985 MT1MQ8N339 61 aa2.13□□□□□ -2.07
SSBP2-204ENST00000504985 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
SSBP2-204ENST00000504985 MT1GP13640 62 aa2.12□□□□□ -2.07
SSBP2-204ENST00000504985 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
SSBP2-204ENST00000504985 PRM1P04553 51 aa2.03□□□□□ -2.08
SSBP2-204ENST00000504985 MT1AP04731 61 aa2.02□□□□□ -2.09
SSBP2-204ENST00000504985 MT4P47944 62 aa2.01□□□□□ -2.09
SSBP2-204ENST00000504985 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
SSBP2-204ENST00000504985 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
SSBP2-204ENST00000504985 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
SSBP2-204ENST00000504985 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
SSBP2-204ENST00000504985 KRTAP6-2Q3LI66 62 aa1.78□□□□□ -2.12
SSBP2-204ENST00000504985 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
SSBP2-204ENST00000504985 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
SSBP2-204ENST00000504985 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
SSBP2-204ENST00000504985 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
SSBP2-204ENST00000504985 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 122.3 ms