RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 SPRR2AP35326 72 aa5.93□□□□□ -1.46
AFF1-205ENST00000504956 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
AFF1-205ENST00000504956 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
AFF1-205ENST00000504956 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.47
AFF1-205ENST00000504956 ROMO1P60602 79 aa5.88□□□□□ -1.47
AFF1-205ENST00000504956 LCE1AQ5T7P2 110 aa5.88□□□□□ -1.47
AFF1-205ENST00000504956 MT1EP04732 61 aa5.86□□□□□ -1.47
AFF1-205ENST00000504956 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
AFF1-205ENST00000504956 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
AFF1-205ENST00000504956 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
AFF1-205ENST00000504956 SPRR2DP22532 72 aa5.72□□□□□ -1.49
AFF1-205ENST00000504956 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
AFF1-205ENST00000504956 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
AFF1-205ENST00000504956 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
AFF1-205ENST00000504956 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
AFF1-205ENST00000504956 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
AFF1-205ENST00000504956 MT1LQ93083 61 aa5.66□□□□□ -1.5
AFF1-205ENST00000504956 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
AFF1-205ENST00000504956 MT1GP13640 62 aa5.6□□□□□ -1.51
AFF1-205ENST00000504956 PP632Q6XCG6 107 aa5.59□□□□□ -1.51
AFF1-205ENST00000504956 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.52
AFF1-205ENST00000504956 KRTAP2-4Q9BYR9 128 aa5.59□□□□□ -1.52
AFF1-205ENST00000504956 MT1MQ8N339 61 aa5.56□□□□□ -1.52
AFF1-205ENST00000504956 KRTAP5-3Q6L8H2 238 aa5.54□□□□□ -1.52
AFF1-205ENST00000504956 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
AFF1-205ENST00000504956 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
AFF1-205ENST00000504956 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
AFF1-205ENST00000504956 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
AFF1-205ENST00000504956 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
AFF1-205ENST00000504956 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
AFF1-205ENST00000504956 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
AFF1-205ENST00000504956 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
AFF1-205ENST00000504956 LCE3CQ5T5A8 94 aa5.3□□□□□ -1.56
AFF1-205ENST00000504956 H3BS24 57 aa5.11□□□□□ -1.59
AFF1-205ENST00000504956 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
AFF1-205ENST00000504956 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
AFF1-205ENST00000504956 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
AFF1-205ENST00000504956 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
AFF1-205ENST00000504956 MT4P47944 62 aa4.99□□□□□ -1.61
AFF1-205ENST00000504956 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
AFF1-205ENST00000504956 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
AFF1-205ENST00000504956 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
AFF1-205ENST00000504956 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
AFF1-205ENST00000504956 MT1AP04731 61 aa4.82□□□□□ -1.64
AFF1-205ENST00000504956 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
AFF1-205ENST00000504956 KRTAP6-1Q3LI64 71 aa4.79□□□□□ -1.64
AFF1-205ENST00000504956 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
AFF1-205ENST00000504956 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
AFF1-205ENST00000504956 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
AFF1-205ENST00000504956 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
AFF1-205ENST00000504956 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
AFF1-205ENST00000504956 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
AFF1-205ENST00000504956 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
AFF1-205ENST00000504956 MT3P25713 68 aa4.38□□□□□ -1.71
AFF1-205ENST00000504956 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
AFF1-205ENST00000504956 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
AFF1-205ENST00000504956 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
AFF1-205ENST00000504956 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
AFF1-205ENST00000504956 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
AFF1-205ENST00000504956 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
AFF1-205ENST00000504956 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
AFF1-205ENST00000504956 INE1O15225 51 aa3.9□□□□□ -1.78
AFF1-205ENST00000504956 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
AFF1-205ENST00000504956 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
AFF1-205ENST00000504956 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
AFF1-205ENST00000504956 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
AFF1-205ENST00000504956 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
AFF1-205ENST00000504956 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
AFF1-205ENST00000504956 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
AFF1-205ENST00000504956 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
AFF1-205ENST00000504956 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
AFF1-205ENST00000504956 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
AFF1-205ENST00000504956 PRM1P04553 51 aa3.06□□□□□ -1.92
AFF1-205ENST00000504956 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
AFF1-205ENST00000504956 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
AFF1-205ENST00000504956 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
AFF1-205ENST00000504956 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
AFF1-205ENST00000504956 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms