RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MP68P56378 58 aa2.22□□□□□ -2.05
GYPB-204ENST00000504951 TMEM258P61165 79 aa2.22□□□□□ -2.05
GYPB-204ENST00000504951 LINC00643Q86TS7 51 aa2.21□□□□□ -2.06
GYPB-204ENST00000504951 MT-ATP8P03928 68 aa2.2□□□□□ -2.06
GYPB-204ENST00000504951 PP632Q6XCG6 107 aa2.2□□□□□ -2.06
GYPB-204ENST00000504951 SPRR5A0A1B0GTR4 108 aa2.19□□□□□ -2.06
GYPB-204ENST00000504951 ATP5EP56381 51 aaPredicted RBP2.19□□□□□ -2.06
GYPB-204ENST00000504951 COX7CP15954 63 aa2.18□□□□□ -2.06
GYPB-204ENST00000504951 CCDC179H3BU77 68 aa2.17□□□□□ -2.06
GYPB-204ENST00000504951 KRTAP13-4Q3LI77 160 aa2.17□□□□□ -2.06
GYPB-204ENST00000504951 PRO0628Q9UI54 55 aa2.17□□□□□ -2.06
GYPB-204ENST00000504951 TRAV7A0A075B6U4 112 aa2.16□□□□□ -2.06
GYPB-204ENST00000504951 H3BPC8 53 aa2.16□□□□□ -2.06
GYPB-204ENST00000504951 SERP2Q8N6R1 65 aa2.16□□□□□ -2.06
GYPB-204ENST00000504951 MT1MQ8N339 61 aa2.15□□□□□ -2.07
GYPB-204ENST00000504951 V9GYY9 64 aa2.15□□□□□ -2.07
GYPB-204ENST00000504951 SMIM26A0A096LP01 95 aa2.14□□□□□ -2.07
GYPB-204ENST00000504951 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
GYPB-204ENST00000504951 SERP1Q9Y6X1 66 aa2.14□□□□□ -2.07
GYPB-204ENST00000504951 ACYP2P14621 99 aa2.13□□□□□ -2.07
GYPB-204ENST00000504951 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
GYPB-204ENST00000504951 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
GYPB-204ENST00000504951 SEC61GP60059 68 aa2.1□□□□□ -2.07
GYPB-204ENST00000504951 A0A0D9SG42 100 aa2.09□□□□□ -2.07
GYPB-204ENST00000504951 SPTSSBQ8NFR3 76 aa2.09□□□□□ -2.07
GYPB-204ENST00000504951 MT1LQ93083 61 aa2.09□□□□□ -2.07
GYPB-204ENST00000504951 CHKB-CPT1BH3BT56 60 aa2.08□□□□□ -2.08
GYPB-204ENST00000504951 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
GYPB-204ENST00000504951 BRK1Q8WUW1 75 aa2.07□□□□□ -2.08
GYPB-204ENST00000504951 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
GYPB-204ENST00000504951 PMAIP1Q13794 54 aa2.05□□□□□ -2.08
GYPB-204ENST00000504951 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
GYPB-204ENST00000504951 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
GYPB-204ENST00000504951 PRAC1Q96KF2 57 aa2.04□□□□□ -2.08
GYPB-204ENST00000504951 SNURFQ9Y675 71 aa2.04□□□□□ -2.08
GYPB-204ENST00000504951 SPATA8Q6RVD6 105 aa2.03□□□□□ -2.08
GYPB-204ENST00000504951 MUC5ACP98088 5654 aa2.01□□□□□ -2.09
GYPB-204ENST00000504951 KRTAP12-1P59990 96 aa2.01□□□□□ -2.09
GYPB-204ENST00000504951 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
GYPB-204ENST00000504951 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
GYPB-204ENST00000504951 H7BZZ5 65 aa2□□□□□ -2.09
GYPB-204ENST00000504951 LCE1CQ5T751 118 aa2□□□□□ -2.09
GYPB-204ENST00000504951 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
GYPB-204ENST00000504951 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
GYPB-204ENST00000504951 Q1T7F1 81 aa1.99□□□□□ -2.09
GYPB-204ENST00000504951 SPANXA2-OT1Q8N9U9 137 aa1.99□□□□□ -2.09
GYPB-204ENST00000504951 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
GYPB-204ENST00000504951 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
GYPB-204ENST00000504951 KTN1-AS1Q86SY8 53 aa1.98□□□□□ -2.09
GYPB-204ENST00000504951 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
GYPB-204ENST00000504951 COA5Q86WW8 74 aa1.97□□□□□ -2.09
GYPB-204ENST00000504951 A0A1B0GU33 70 aa1.96□□□□□ -2.1
GYPB-204ENST00000504951 A8MU10 97 aa1.96□□□□□ -2.1
GYPB-204ENST00000504951 PRR15LQ9BU68 103 aa1.94□□□□□ -2.1
GYPB-204ENST00000504951 A6NED7 52 aa1.93□□□□□ -2.1
GYPB-204ENST00000504951 TNP1P09430 55 aa1.91□□□□□ -2.1
GYPB-204ENST00000504951 CDC42SE1Q9NRR8 79 aa1.91□□□□□ -2.1
GYPB-204ENST00000504951 PSPHP1O15172 72 aa1.9□□□□□ -2.11
GYPB-204ENST00000504951 KRTAP12-3P60328 96 aa1.9□□□□□ -2.11
GYPB-204ENST00000504951 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
GYPB-204ENST00000504951 A0A1B0GU69 56 aa1.85□□□□□ -2.11
GYPB-204ENST00000504951 UQCR11O14957 56 aa1.82□□□□□ -2.12
GYPB-204ENST00000504951 K7ERS5 55 aa1.81□□□□□ -2.12
GYPB-204ENST00000504951 MT1AP04731 61 aa1.78□□□□□ -2.12
GYPB-204ENST00000504951 MIR22HGQ0VDD5 57 aa1.78□□□□□ -2.12
GYPB-204ENST00000504951 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
GYPB-204ENST00000504951 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
GYPB-204ENST00000504951 KRTAP25-1Q3LHN0 102 aa1.73□□□□□ -2.13
GYPB-204ENST00000504951 ROMO1P60602 79 aa1.69□□□□□ -2.14
GYPB-204ENST00000504951 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
GYPB-204ENST00000504951 LUZP6Q538Z0 58 aa1.58□□□□□ -2.16
GYPB-204ENST00000504951 LCE3DQ9BYE3 92 aa1.58□□□□□ -2.16
GYPB-204ENST00000504951 INE1O15225 51 aa1.42□□□□□ -2.18
GYPB-204ENST00000504951 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
GYPB-204ENST00000504951 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
GYPB-204ENST00000504951 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
GYPB-204ENST00000504951 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
GYPB-204ENST00000504951 PRM1P04553 51 aa0.82□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 140.2 ms