RNA–Protein interactions for RNA: ENST00000504381.5

ATP2C1-205, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 2 BASIC

Gene ATP2C1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-205ENST00000504381 KRTAP19-5Q3LI72 72 aa1.83□□□□□ -2.12
ATP2C1-205ENST00000504381 LCE3CQ5T5A8 94 aa1.83□□□□□ -2.12
ATP2C1-205ENST00000504381 KRTAP4-8A0A0G2JLE6 195 aa1.8□□□□□ -2.12
ATP2C1-205ENST00000504381 LCE1DQ5T752 114 aa1.8□□□□□ -2.12
ATP2C1-205ENST00000504381 LCE5AQ5TCM9 118 aa1.79□□□□□ -2.12
ATP2C1-205ENST00000504381 KRTAP9-6A8MVA2 160 aa1.79□□□□□ -2.12
ATP2C1-205ENST00000504381 KRTAP4-7Q9BYR0 210 aa1.75□□□□□ -2.13
ATP2C1-205ENST00000504381 SSPOA2VEC9 5147 aa1.75□□□□□ -2.13
ATP2C1-205ENST00000504381 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
ATP2C1-205ENST00000504381 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
ATP2C1-205ENST00000504381 KRTAP2-3P0C7H8 128 aa1.73□□□□□ -2.13
ATP2C1-205ENST00000504381 KRTAP2-4Q9BYR9 128 aa1.73□□□□□ -2.13
ATP2C1-205ENST00000504381 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
ATP2C1-205ENST00000504381 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
ATP2C1-205ENST00000504381 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
ATP2C1-205ENST00000504381 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
ATP2C1-205ENST00000504381 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
ATP2C1-205ENST00000504381 KRTAP4-11Q9BYQ6 195 aa1.7□□□□□ -2.14
ATP2C1-205ENST00000504381 KRTAP4-9Q9BYQ8 210 aa1.69□□□□□ -2.14
ATP2C1-205ENST00000504381 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
ATP2C1-205ENST00000504381 MT1LQ93083 61 aa1.67□□□□□ -2.14
ATP2C1-205ENST00000504381 KRTAP4-2Q9BYR5 136 aa1.66□□□□□ -2.14
ATP2C1-205ENST00000504381 MT1EP04732 61 aa1.65□□□□□ -2.15
ATP2C1-205ENST00000504381 OBSCNQ5VST9 7968 aa1.64□□□□□ -2.15
ATP2C1-205ENST00000504381 SYNE1Q8NF91 8797 aaKnown RBP1.63□□□□□ -2.15
ATP2C1-205ENST00000504381 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
ATP2C1-205ENST00000504381 MT1GP13640 62 aa1.6□□□□□ -2.15
ATP2C1-205ENST00000504381 KRTAP19-6Q3LI70 58 aa1.6□□□□□ -2.15
ATP2C1-205ENST00000504381 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
ATP2C1-205ENST00000504381 KRTAP12-4P60329 112 aa1.59□□□□□ -2.16
ATP2C1-205ENST00000504381 KRTAP20-1Q3LI63 56 aa1.59□□□□□ -2.16
ATP2C1-205ENST00000504381 KRTAP5-3Q6L8H2 238 aa1.56□□□□□ -2.16
ATP2C1-205ENST00000504381 KRTAP5-9P26371 169 aa1.55□□□□□ -2.16
ATP2C1-205ENST00000504381 MDN1Q9NU22 5596 aa1.55□□□□□ -2.16
ATP2C1-205ENST00000504381 MACF1Q9UPN3 7388 aaKnown RBP1.54□□□□□ -2.16
ATP2C1-205ENST00000504381 LCE1AQ5T7P2 110 aa1.53□□□□□ -2.16
ATP2C1-205ENST00000504381 MT1MQ8N339 61 aa1.53□□□□□ -2.16
ATP2C1-205ENST00000504381 LCE1FQ5T754 118 aa1.52□□□□□ -2.17
ATP2C1-205ENST00000504381 KRTAP19-3Q7Z4W3 81 aa1.52□□□□□ -2.17
ATP2C1-205ENST00000504381 NEBP20929 6669 aa1.51□□□□□ -2.17
ATP2C1-205ENST00000504381 KRTAP2-2Q9BYT5 123 aa1.5□□□□□ -2.17
ATP2C1-205ENST00000504381 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
ATP2C1-205ENST00000504381 SPRR2FQ96RM1 72 aa1.44□□□□□ -2.18
ATP2C1-205ENST00000504381 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
ATP2C1-205ENST00000504381 MT1AP04731 61 aa1.43□□□□□ -2.18
ATP2C1-205ENST00000504381 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
ATP2C1-205ENST00000504381 LCE3EQ5T5B0 92 aa1.42□□□□□ -2.18
ATP2C1-205ENST00000504381 PRM1P04553 51 aa1.42□□□□□ -2.18
ATP2C1-205ENST00000504381 KRTAP5-5Q701N2 237 aaPredicted RBP1.41□□□□□ -2.18
ATP2C1-205ENST00000504381 MT3P25713 68 aa1.4□□□□□ -2.19
ATP2C1-205ENST00000504381 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
ATP2C1-205ENST00000504381 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.2
ATP2C1-205ENST00000504381 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
ATP2C1-205ENST00000504381 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
ATP2C1-205ENST00000504381 SPRR2EP22531 72 aa1.27□□□□□ -2.21
ATP2C1-205ENST00000504381 SPRR2BP35325 72 aa1.27□□□□□ -2.21
ATP2C1-205ENST00000504381 SPRR2AP35326 72 aa1.27□□□□□ -2.21
ATP2C1-205ENST00000504381 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.26□□□□□ -2.21
ATP2C1-205ENST00000504381 KRTAP5-4Q6L8H1 288 aa1.23□□□□□ -2.21
ATP2C1-205ENST00000504381 SPRR2DP22532 72 aa1.23□□□□□ -2.21
ATP2C1-205ENST00000504381 LCE1EQ5T753 118 aa1.22□□□□□ -2.21
ATP2C1-205ENST00000504381 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
ATP2C1-205ENST00000504381 KRTAP5-11Q6L8G4 156 aa1.19□□□□□ -2.22
ATP2C1-205ENST00000504381 MT4P47944 62 aa1.13□□□□□ -2.23
ATP2C1-205ENST00000504381 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
ATP2C1-205ENST00000504381 KRTAP20-2Q3LI61 65 aa1.05□□□□□ -2.24
ATP2C1-205ENST00000504381 KRTAP5-2Q701N4 177 aa1.05□□□□□ -2.24
ATP2C1-205ENST00000504381 MUC19Q7Z5P9 8384 aa1.04□□□□□ -2.24
ATP2C1-205ENST00000504381 KRTAP5-8O75690 187 aa1.04□□□□□ -2.24
ATP2C1-205ENST00000504381 LCE1BQ5T7P3 118 aa1.03□□□□□ -2.24
ATP2C1-205ENST00000504381 KRTAP5-1Q6L8H4 278 aa1□□□□□ -2.25
ATP2C1-205ENST00000504381 KRTAP4-4Q9BYR3 166 aa0.98□□□□□ -2.25
ATP2C1-205ENST00000504381 LCE1CQ5T751 118 aa0.92□□□□□ -2.26
ATP2C1-205ENST00000504381 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
ATP2C1-205ENST00000504381 KRTAP21-1Q3LI58 79 aa0.88□□□□□ -2.27
ATP2C1-205ENST00000504381 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
ATP2C1-205ENST00000504381 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms