RNA–Protein interactions for RNA: ENST00000504160.1

RNF44-202, Transcript of ring finger protein 44, humanhuman

TSL 3

Gene RNF44, Length 887 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-202ENST00000504160 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
RNF44-202ENST00000504160 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
RNF44-202ENST00000504160 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
RNF44-202ENST00000504160 MT1GP13640 62 aa6.15□□□□□ -1.42
RNF44-202ENST00000504160 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
RNF44-202ENST00000504160 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
RNF44-202ENST00000504160 A6NED7 52 aa6.1□□□□□ -1.43
RNF44-202ENST00000504160 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
RNF44-202ENST00000504160 MT1LQ93083 61 aa6.09□□□□□ -1.43
RNF44-202ENST00000504160 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
RNF44-202ENST00000504160 MT1MQ8N339 61 aa6.04□□□□□ -1.44
RNF44-202ENST00000504160 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
RNF44-202ENST00000504160 CDC42SE1Q9NRR8 79 aa6□□□□□ -1.45
RNF44-202ENST00000504160 GPR98Q8WXG9 6306 aa5.9□□□□□ -1.46
RNF44-202ENST00000504160 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
RNF44-202ENST00000504160 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
RNF44-202ENST00000504160 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
RNF44-202ENST00000504160 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
RNF44-202ENST00000504160 ROMO1P60602 79 aa5.78□□□□□ -1.48
RNF44-202ENST00000504160 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
RNF44-202ENST00000504160 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
RNF44-202ENST00000504160 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
RNF44-202ENST00000504160 MT4P47944 62 aa5.72□□□□□ -1.49
RNF44-202ENST00000504160 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
RNF44-202ENST00000504160 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
RNF44-202ENST00000504160 KTN1-AS1Q86SY8 53 aa5.65□□□□□ -1.5
RNF44-202ENST00000504160 KRTAP5-4Q6L8H1 288 aa5.64□□□□□ -1.51
RNF44-202ENST00000504160 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
RNF44-202ENST00000504160 LCE3CQ5T5A8 94 aa5.55□□□□□ -1.52
RNF44-202ENST00000504160 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
RNF44-202ENST00000504160 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
RNF44-202ENST00000504160 KRTAP5-5Q701N2 237 aaPredicted RBP5.49□□□□□ -1.53
RNF44-202ENST00000504160 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
RNF44-202ENST00000504160 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
RNF44-202ENST00000504160 KRTAP12-4P60329 112 aa5.4□□□□□ -1.54
RNF44-202ENST00000504160 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
RNF44-202ENST00000504160 KRTAP20-2Q3LI61 65 aa5.34□□□□□ -1.55
RNF44-202ENST00000504160 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
RNF44-202ENST00000504160 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
RNF44-202ENST00000504160 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
RNF44-202ENST00000504160 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
RNF44-202ENST00000504160 MT1AP04731 61 aa5.19□□□□□ -1.58
RNF44-202ENST00000504160 KRTAP9-6A8MVA2 160 aa5.18□□□□□ -1.58
RNF44-202ENST00000504160 KRTAP6-1Q3LI64 71 aa5.15□□□□□ -1.59
RNF44-202ENST00000504160 KRTAP9-4Q9BYQ2 154 aa5.01□□□□□ -1.61
RNF44-202ENST00000504160 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
RNF44-202ENST00000504160 KRTAP6-2Q3LI66 62 aa4.91□□□□□ -1.62
RNF44-202ENST00000504160 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
RNF44-202ENST00000504160 MT3P25713 68 aa4.77□□□□□ -1.65
RNF44-202ENST00000504160 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
RNF44-202ENST00000504160 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
RNF44-202ENST00000504160 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
RNF44-202ENST00000504160 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
RNF44-202ENST00000504160 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
RNF44-202ENST00000504160 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
RNF44-202ENST00000504160 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
RNF44-202ENST00000504160 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
RNF44-202ENST00000504160 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
RNF44-202ENST00000504160 LCE1EQ5T753 118 aa4.31□□□□□ -1.72
RNF44-202ENST00000504160 H3BS24 57 aa4.17□□□□□ -1.74
RNF44-202ENST00000504160 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
RNF44-202ENST00000504160 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
RNF44-202ENST00000504160 KRTAP4-2Q9BYR5 136 aa4.04□□□□□ -1.76
RNF44-202ENST00000504160 LCE1CQ5T751 118 aa4□□□□□ -1.77
RNF44-202ENST00000504160 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
RNF44-202ENST00000504160 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
RNF44-202ENST00000504160 INE1O15225 51 aa3.66□□□□□ -1.82
RNF44-202ENST00000504160 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
RNF44-202ENST00000504160 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
RNF44-202ENST00000504160 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
RNF44-202ENST00000504160 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
RNF44-202ENST00000504160 KRTAP21-2Q3LI59 83 aa3.37□□□□□ -1.87
RNF44-202ENST00000504160 PHGR1C9JFL3 82 aa3.12□□□□□ -1.91
RNF44-202ENST00000504160 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
RNF44-202ENST00000504160 PRM1P04553 51 aa2.96□□□□□ -1.94
RNF44-202ENST00000504160 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
RNF44-202ENST00000504160 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
RNF44-202ENST00000504160 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 5.3 ms